RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TPGS2Q68CL5 300 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 PSAPL1Q6NUJ1 521 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 ALKAL1Q6UXT8 129 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 MTMR9Q96QG7 549 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 LSM14BQ9BX40 385 aaKnown RBP20.81■□□□□ 0.92
SSRP1-204ENST00000529002 CRISPLD1Q9H336 500 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 C8orf33Q9H7E9 229 aaPredicted RBP20.81■□□□□ 0.92
SSRP1-204ENST00000529002 AFF4Q9UHB7 1163 aaKnown RBP20.81■□□□□ 0.92
SSRP1-204ENST00000529002 CYP46A1Q9Y6A2 500 aa20.81■□□□□ 0.92
SSRP1-204ENST00000529002 MEFVO15553 781 aaPredicted RBP20.8■□□□□ 0.92
SSRP1-204ENST00000529002 CTDNEP1O95476 244 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 NAMPTP43490 491 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 RAP1GAPP47736 663 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 FOSBP53539 338 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 MLLT6P55198 1093 aaPredicted RBP20.8■□□□□ 0.92
SSRP1-204ENST00000529002 FCHO2Q0JRZ9 810 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 CCINQ13939 588 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 TMC8Q8IU68 726 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 ARID3BQ8IVW6 561 aaPredicted RBP20.8■□□□□ 0.92
SSRP1-204ENST00000529002 GAB3Q8WWW8 586 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 PGLYRP2Q96PD5 576 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 DNAJC25Q9H1X3 360 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 CDT1Q9H211 546 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 YIPF1Q9Y548 306 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 NUB1Q9Y5A7 615 aa20.8■□□□□ 0.92
SSRP1-204ENST00000529002 NEMFO60524 1076 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 RPP40O75818 363 aaKnown RBP20.79■□□□□ 0.92
SSRP1-204ENST00000529002 TOP3BO95985 862 aaKnown RBP20.79■□□□□ 0.92
SSRP1-204ENST00000529002 CPB1P15086 417 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 XBP1P17861 261 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 CYP11B2P19099 503 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 KRT2P35908 639 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 UNQ6494/PRO21346Q6UXR6 183 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 FAM200AQ8TCP9 573 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 DDX12PQ92771 950 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 MKNK1Q9BUB5 465 aa20.79■□□□□ 0.92
SSRP1-204ENST00000529002 TIMM13Q9Y5L4 95 aaPredicted RBP20.79■□□□□ 0.92
SSRP1-204ENST00000529002 STK36Q9NRP7 1315 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 HOXA6P31267 233 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 MCM4P33991 863 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 GRM5P41594 1212 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 PLA2G2CQ5R387 149 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 ZNF280DQ6N043 979 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 CACNA2D4Q7Z3S7 1137 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 RALGPS2Q86X27 583 aaPredicted RBP20.78■□□□□ 0.92
SSRP1-204ENST00000529002 SUSD3Q96L08 255 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 TBC1D32Q96NH3 1257 aa20.78■□□□□ 0.92
SSRP1-204ENST00000529002 CCDC94Q9BW85 323 aaPredicted RBP20.78■□□□□ 0.92
SSRP1-204ENST00000529002 ORC3Q9UBD5 711 aaPredicted RBP20.78■□□□□ 0.92
SSRP1-204ENST00000529002 ARHGEF35A5YM69 484 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 CCDC192P0DO97 292 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 MPLP40238 635 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 CDR1P51861 262 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 YARSP54577 528 aaKnown RBP20.77■□□□□ 0.92
SSRP1-204ENST00000529002 RNF43Q68DV7 783 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 LEMD2Q8NC56 503 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 E2F7Q96AV8 911 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 MSANTD3Q96H12 275 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 LOXL4Q96JB6 756 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 NACC1Q96RE7 527 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 TUFT1Q9NNX1 390 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 PDRG1Q9NUG6 133 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 TNFSF13BQ9Y275 285 aa20.77■□□□□ 0.92
SSRP1-204ENST00000529002 DENND4CQ5VZ89 1909 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 THADAQ6YHU6 1953 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 MYO16Q9Y6X6 1858 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 BTBD18B2RXH4 712 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 SOAT2O75908 522 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 CDKL5O76039 1030 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 FDPSP14324 419 aaKnown RBP20.76■□□□□ 0.91
SSRP1-204ENST00000529002 NOVA1P51513 510 aaKnown RBP20.76■□□□□ 0.91
SSRP1-204ENST00000529002 CACNB1Q02641 598 aaPredicted RBP20.76■□□□□ 0.91
SSRP1-204ENST00000529002 FOXC1Q12948 553 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 ZNF568Q3ZCX4 644 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 GAREM2Q75VX8 874 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 ACO2Q99798 780 aaKnown RBP20.76■□□□□ 0.91
SSRP1-204ENST00000529002 GPR88Q9GZN0 384 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 PTPRHQ9HD43 1115 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 SLC38A7Q9NVC3 462 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 TPCN1Q9ULQ1 816 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 SLC27A5Q9Y2P5 690 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 LAMA1P25391 3075 aa20.76■□□□□ 0.91
SSRP1-204ENST00000529002 PRAMEF12O95522 483 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 HARSP12081 509 aaKnown RBP20.75■□□□□ 0.91
SSRP1-204ENST00000529002 DUSP4Q13115 394 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 PPP2R5AQ15172 486 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 ECM1Q16610 540 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 SEZ6Q53EL9 994 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 C1orf228Q6PIY5 440 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 TAS1R3Q7RTX0 852 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 TTC9BQ8N6N2 239 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 TARS2Q9BW92 718 aaKnown RBP20.75■□□□□ 0.91
SSRP1-204ENST00000529002 SMG9Q9H0W8 520 aaKnown RBP20.75■□□□□ 0.91
SSRP1-204ENST00000529002 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
SSRP1-204ENST00000529002 TUBGCP4Q9UGJ1 667 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 ASCC3Q8N3C0 2202 aaKnown RBP20.75■□□□□ 0.91
SSRP1-204ENST00000529002 ZZEF1O43149 2961 aa20.75■□□□□ 0.91
SSRP1-204ENST00000529002 ASPMQ8IZT6 3477 aa20.74■□□□□ 0.91
SSRP1-204ENST00000529002 SPEGQ15772 3267 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms