RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
SRPRA-202ENST00000527817 MUTP22033 750 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 KCNA4P22459 653 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 CTHP32929 405 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 CCINQ13939 588 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
SRPRA-202ENST00000527817 STPG1Q5TH74 334 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 TXNDC11Q6PKC3 985 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 Q6ZS52 159 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 C12orf50Q8NA57 414 aaPredicted RBP13.47□□□□□ -0.25
SRPRA-202ENST00000527817 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 ACAP3Q96P50 834 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
SRPRA-202ENST00000527817 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 OBP2AQ9NY56 170 aa13.47□□□□□ -0.25
SRPRA-202ENST00000527817 SLC38A8A6NNN8 435 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 EPN2O95208 641 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 KCNK5O95279 499 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 MARCKSP29966 332 aaPredicted RBP13.46□□□□□ -0.25
SRPRA-202ENST00000527817 SOX9P48436 509 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 PLA2G2CQ5R387 149 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 ARID3BQ8IVW6 561 aaPredicted RBP13.46□□□□□ -0.25
SRPRA-202ENST00000527817 CEP120Q8N960 986 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 GAB3Q8WWW8 586 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 DDX12PQ92771 950 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 TBC1D32Q96NH3 1257 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 LRRC3BQ96PB8 259 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 KIFC3Q9BVG8 833 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.25
SRPRA-202ENST00000527817 CDT1Q9H211 546 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 TMEM134Q9H6X4 195 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 POLD4Q9HCU8 107 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 RXFP3Q9NSD7 469 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 PCDHGA5Q9Y5G8 931 aa13.46□□□□□ -0.25
SRPRA-202ENST00000527817 PDCD11Q14690 1871 aaKnown RBP13.45□□□□□ -0.26
SRPRA-202ENST00000527817 A0A1W2PRU2 124 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 DTNBO60941 627 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 OAZ2O95190 189 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 CPB1P15086 417 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 WEE1P30291 646 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 OSTNP61366 133 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 PLD1Q13393 1074 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 PON2Q15165 354 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 HAUS6Q7Z4H7 955 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 TMC8Q8IU68 726 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 ERMNQ8TAM6 284 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 C18orf25Q96B23 403 aaPredicted RBP13.45□□□□□ -0.26
SRPRA-202ENST00000527817 ZC3H10Q96K80 434 aaKnown RBP13.45□□□□□ -0.26
SRPRA-202ENST00000527817 GTSE1Q9NYZ3 720 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
SRPRA-202ENST00000527817 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 ASPMQ8IZT6 3477 aa13.45□□□□□ -0.26
SRPRA-202ENST00000527817 M0QZQ0 153 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 DPYSL4O14531 572 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 EXTL3O43909 919 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 RPP40O75818 363 aaKnown RBP13.44□□□□□ -0.26
SRPRA-202ENST00000527817 AKAP3O75969 853 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 VNN2O95498 520 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 MCF2P10911 925 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 PROZP22891 400 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 HOXC13P31276 330 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 MCM4P33991 863 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 ALDH1A3P47895 512 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 EPHB3P54753 998 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 KBTBD6Q86V97 674 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 MRPL4Q9BYD3 311 aaKnown RBP13.44□□□□□ -0.26
SRPRA-202ENST00000527817 DNAJC25Q9H1X3 360 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
SRPRA-202ENST00000527817 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 FASNP49327 2511 aaKnown RBP13.44□□□□□ -0.26
SRPRA-202ENST00000527817 ZFYVE26Q68DK2 2539 aa13.44□□□□□ -0.26
SRPRA-202ENST00000527817 PHLPP2Q6ZVD8 1323 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 CITO14578 2027 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 ABLIM1O14639 778 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 ATG13O75143 517 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 FGF19O95750 216 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 MCM7P33993 719 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 NPTX2P47972 431 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
SRPRA-202ENST00000527817 DUSP4Q13115 394 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 GPR17Q13304 367 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 PTPAQ15257 358 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 CCDC6Q16204 474 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 GAREM2Q75VX8 874 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 TAS1R3Q7RTX0 852 aa13.43□□□□□ -0.26
SRPRA-202ENST00000527817 DNAJB7Q7Z6W7 309 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms