RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ASAP3Q8TDY4 903 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 CLEC4DQ8WXI8 215 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 EPAS1Q99814 870 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 COLEC11Q9BWP8 271 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 DNAJC17Q9NVM6 304 aaKnown RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 SLC8A2Q9UPR5 921 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 PI4K2BG5E9Z4 385 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 COMTP21964 271 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 GNGT1P63211 74 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 CCDC6Q16204 474 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 FEZF2Q8TBJ5 459 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 C1orf54Q8WWF1 131 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 ZBTB45Q96K62 511 aaPredicted RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 SNTG2Q9NY99 539 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 EXOC1LA0A1B0GW35 172 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 GOLGA8CPA6NN73 597 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 RASGRF2O14827 1237 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 ATMINO43313 823 aaPredicted RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 SULT1E1P49888 294 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 EPHB1P54762 984 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 EFHC1Q5JVL4 640 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 TMEM161BQ8NDZ6 487 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 CISHQ9NSE2 258 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 ANKRD63C9JTQ0 380 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 FGFR4P22455 802 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 DHX34Q14147 1143 aaKnown RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 NPY5RQ15761 445 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 GJC2Q5T442 439 aaPredicted RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 CXCL17Q6UXB2 119 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 CDKL3Q8IVW4 592 aaPredicted RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 RAB3IL1Q8TBN0 382 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP47-207ENST00000527733 GRAP2O75791 330 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
USP47-207ENST00000527733 ANO5Q75V66 913 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 EHD2Q9NZN4 543 aa15.91■□□□□ 0.14
USP47-207ENST00000527733 CABYRO75952 493 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 FARP2O94887 1054 aaPredicted RBP15.9■□□□□ 0.14
USP47-207ENST00000527733 RTP1P59025 263 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 MAP7D1Q3KQU3 841 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 TADA2BQ86TJ2 420 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 THAP2Q9H0W7 228 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ARHGAP20Q9P2F6 1191 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
USP47-207ENST00000527733 TTC7AQ9ULT0 858 aaPredicted RBP15.9■□□□□ 0.14
USP47-207ENST00000527733 MMEP08473 750 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 TROVE2P10155 538 aaKnown RBP eCLIP15.9■□□□□ 0.14
USP47-207ENST00000527733 RAB27AP51159 221 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ROR1Q01973 937 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 CAPS2Q9BXY5 557 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 SAYSD1Q9NPB0 183 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 COL20A1Q9P218 1284 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ZC3H4Q9UPT8 1303 aaKnown RBP15.9■□□□□ 0.14
USP47-207ENST00000527733 CYB561D2O14569 222 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 GHRP10912 638 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 SERPINB6P35237 376 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 RRP1BQ14684 758 aaKnown RBP15.9■□□□□ 0.14
USP47-207ENST00000527733 ECM1Q16610 540 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 AMHR2Q16671 573 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 UGCGQ16739 394 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 FBXO47Q5MNV8 452 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 SPOPLQ6IQ16 392 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ABHD15Q6UXT9 468 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ACOT1Q86TX2 421 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 REXO1L1PQ8IX06 675 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 PIDD1Q9HB75 910 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 HPCAL4Q9UM19 191 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 PLCH1Q4KWH8 1693 aa15.9■□□□□ 0.14
USP47-207ENST00000527733 ZNF185O15231 689 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 ACSL3O95573 720 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 SLCO1A2P46721 670 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 THOC5Q13769 683 aaKnown RBP15.89■□□□□ 0.14
USP47-207ENST00000527733 VSIG1Q86XK7 387 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 ATL2Q8NHH9 583 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 SCYL1Q96KG9 808 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 ZNF518BQ9C0D4 1074 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 AMACRQ9UHK6 382 aa15.89■□□□□ 0.14
USP47-207ENST00000527733 ESYT3A0FGR9 886 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 APOL1O14791 398 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 CCNE2O96020 404 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 KRT14P02533 472 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 YY1P25490 414 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 SPATA20Q8TB22 786 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 TMEM169Q96HH4 297 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 PLEKHA5Q9HAU0 1116 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 INTS9Q9NV88 658 aaKnown RBP15.89■□□□□ 0.13
USP47-207ENST00000527733 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 GCNT1Q02742 428 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 GPS1Q13098 491 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 SEPT6Q14141 434 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 ANKRD20A3Q5VUR7 823 aa15.89■□□□□ 0.13
USP47-207ENST00000527733 NT5DC4Q86YG4 428 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms