RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OXCT2Q9BYC2 517 aaPredicted RBP17.58■□□□□ 0.4
PTPRU-210ENST00000527027 PARD6AQ9NPB6 346 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 KCNG1Q9UIX4 513 aa17.58■□□□□ 0.4
PTPRU-210ENST00000527027 ACACBO00763 2458 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 HEPACAM2A8MVW5 462 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 CHRNB1P11230 501 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 CCNE1P24864 410 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 TOB1P50616 345 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-210ENST00000527027 HMGN5P82970 282 aaKnown RBP17.57■□□□□ 0.4
PTPRU-210ENST00000527027 STRN3Q13033 797 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 SEZ6Q53EL9 994 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 LAIR1Q6GTX8 287 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 BEST2Q8NFU1 509 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 CNTNAP3BQ96NU0 1288 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 CNTNAP3Q9BZ76 1288 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 SLITRK6Q9H5Y7 841 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 ANKFY1Q9P2R3 1169 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
PTPRU-210ENST00000527027 CACNA1BQ00975 2339 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 DCDC2BA2VCK2 349 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 PP2D1A8MPX8 630 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 M0QZQ0 153 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 ARNTLO00327 626 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 EIF5BO60841 1220 aaKnown RBP17.56■□□□□ 0.4
PTPRU-210ENST00000527027 OAZ2O95190 189 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 U2AF2P26368 475 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPRU-210ENST00000527027 CDC25AP30304 524 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 YWHAHQ04917 246 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-210ENST00000527027 NOLC1Q14978 699 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPRU-210ENST00000527027 LPAL2Q16609 132 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 ZPBP2Q6X784 338 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 FAM184AQ8NB25 1140 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 SHKBP1Q8TBC3 707 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 MSANTD3Q96H12 275 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 MMTAG2Q9BU76 263 aaKnown RBP17.56■□□□□ 0.4
PTPRU-210ENST00000527027 LRRC3Q9BY71 257 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 PLEKHA5Q9HAU0 1116 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 YIPF1Q9Y548 306 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 PCDHB6Q9Y5E3 794 aa17.56■□□□□ 0.4
PTPRU-210ENST00000527027 LAD1O00515 517 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 CHADO15335 359 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 CLDN3O15551 220 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 RETP07949 1114 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 PLS3P13797 630 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 LRPAP1P30533 357 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 SMTNP53814 917 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 SATB1Q01826 763 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 MCL1Q07820 350 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 SPEM2Q0P670 501 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 PLD1Q13393 1074 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 IL17AQ16552 155 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 C1orf228Q6PIY5 440 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 DTHD1Q6ZMT9 781 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 SPEM1Q8N4L4 309 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 TMEM161BQ8NDZ6 487 aa17.55■□□□□ 0.4
PTPRU-210ENST00000527027 C8orf33Q9H7E9 229 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-210ENST00000527027 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-210ENST00000527027 NCANO14594 1321 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 A0A1W2PRU2 124 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 TTC26A0AVF1 554 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 LRP3O75074 770 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 VNN2O95498 520 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 CLTAP09496 248 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
PTPRU-210ENST00000527027 CYP3A5P20815 502 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 PRPHP41219 470 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 EPHB3P54753 998 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 FCHO2Q0JRZ9 810 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 DUSP4Q13115 394 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 GPR17Q13304 367 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 LRRC32Q14392 662 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 GAS6Q14393 721 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 ZBTB6Q15916 424 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 PRR23BQ6ZRT6 265 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 USP37Q86T82 979 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 TMC8Q8IU68 726 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 RSPRY1Q96DX4 576 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 KIF12Q96FN5 646 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
PTPRU-210ENST00000527027 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-210ENST00000527027 OR6C75A6NL08 312 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 CXCL8P10145 99 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 CNR2P34972 360 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 ALDH1A3P47895 512 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 AARSP49588 968 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPRU-210ENST00000527027 KPNA1P52294 538 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-210ENST00000527027 SPAG1Q07617 926 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 RAD51AP2Q09MP3 1159 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 SIM2Q14190 667 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-210ENST00000527027 TMEM130Q8N3G9 435 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 KCTD17Q8N5Z5 321 aa17.53■□□□□ 0.4
PTPRU-210ENST00000527027 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-210ENST00000527027 HAPLN2Q9GZV7 340 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms