RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 KCNK5O95279 499 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 PXNP49023 591 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 OSTNP61366 133 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 FCHO2Q0JRZ9 810 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 SCRN1Q12765 414 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 MRPL58Q14197 206 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 PON2Q15165 354 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 DGKKQ5KSL6 1271 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 STXBP5Q5T5C0 1151 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 C1orf228Q6PIY5 440 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 LEMD2Q8NC56 503 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 TNFRSF25Q93038 417 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 ZFYVE19Q96K21 471 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 ZMAT2Q96NC0 199 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 GTSE1Q9NYZ3 720 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 ABCA7Q8IZY2 2146 aa13.69□□□□□ -0.22
CCDC90B-205ENST00000525916 A0A1W2PRU2 124 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 EXTL3O43909 919 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 NEMFO60524 1076 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 CDKL5O76039 1030 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 CPB1P15086 417 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 HOXA6P31267 233 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 KRT2P35908 639 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 RAP1GAPP47736 663 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 CCINQ13939 588 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 ZNF280DQ6N043 979 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 PSAPL1Q6NUJ1 521 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 PKN3Q6P5Z2 889 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 UNQ6494/PRO21346Q6UXR6 183 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 RNF19BQ6ZMZ0 732 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 CATSPER3Q86XQ3 398 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 TMC8Q8IU68 726 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 GAB3Q8WWW8 586 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 AFF4Q9UHB7 1163 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 ZMIZ1Q9ULJ6 1067 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 YIPF1Q9Y548 306 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 WDFY3Q8IZQ1 3526 aa13.68□□□□□ -0.22
CCDC90B-205ENST00000525916 PFKFB2O60825 505 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 RPP40O75818 363 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 MCM4P33991 863 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 MPLP40238 635 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 GRM5P41594 1212 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 YARSP54577 528 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 PPP2R5AQ15172 486 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 XKR4Q5GH76 650 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 PLA2G2CQ5R387 149 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 TCEAL6Q6IPX3 200 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 DDX12PQ92771 950 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 TCEAL3Q969E4 200 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 LOXL4Q96JB6 756 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 SUSD3Q96L08 255 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 MTMR9Q96QG7 549 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 CCDC94Q9BW85 323 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 LRRC3Q9BY71 257 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 GPR88Q9GZN0 384 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 CDT1Q9H211 546 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 TUFT1Q9NNX1 390 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 TOPORSQ9NS56 1045 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
CCDC90B-205ENST00000525916 PTPRDP23468 1912 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 ARHGEF35A5YM69 484 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 VNN2O95498 520 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 CYP11B2P19099 503 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 TNK2Q07912 1038 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 ME3Q16798 604 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 PGLYRP2Q96PD5 576 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 MKNK1Q9BUB5 465 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 DNAJC25Q9H1X3 360 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 CRISPLD1Q9H336 500 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 LIMCH1Q9UPQ0 1083 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 ASCC3Q8N3C0 2202 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-205ENST00000525916 IGF2RP11717 2491 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 GIPC1O14908 333 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 LARGE1O95461 756 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms