RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 SF3B3Q15393 1217 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ATP2B3Q16720 1220 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ABCB5Q2M3G0 1257 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 LRCH2Q5VUJ6 765 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 RHOT1Q8IXI2 618 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 CBARPQ8N350 705 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 NUP133Q8WUM0 1156 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 RAB24Q969Q5 203 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 TMEM125Q96AQ2 219 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 PDLIM2Q96JY6 352 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 MED15Q96RN5 788 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 ASPSCR1Q9BZE9 553 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 SEMA4GQ9NTN9 838 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 GPR45Q9Y5Y3 372 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 COL11A2P13942 1736 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 KIF21BO75037 1637 aa3.44□□□□□ -1.86
ECHDC1-218ENST00000525745 YY2O15391 372 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 C1QL1O75973 258 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 HAUS5O94927 633 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 AGXTP21549 392 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 SLFN5Q08AF3 891 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 EFCAB2Q5VUJ9 269 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 LNX2Q8N448 690 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 NAF1Q96HR8 494 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 C11orf54Q9H0W9 315 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 TYW1Q9NV66 732 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 SLC17A6Q9P2U8 582 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 INTUQ9ULD6 942 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 CDYLQ9Y232 598 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 CEP162Q5TB80 1403 aa3.43□□□□□ -1.86
ECHDC1-218ENST00000525745 SMARCA2P51531 1590 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 POLR2AP24928 1970 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ORC4O43929 436 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA12O60330 932 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 RBMXL2O75526 392 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ALDH1L1O75891 902 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 SNUPNO95149 360 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ATP8B2P98198 1209 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 DACT2Q5SW24 774 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 RSPH3Q86UC2 560 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ZBTB46Q86UZ6 589 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 GLCCI1Q86VQ1 547 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 NLGN4YQ8NFZ3 816 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 STAG1Q8WVM7 1258 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 NRG4Q8WWG1 115 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 SSH1Q8WYL5 1049 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 JADE3Q92613 823 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 FBXL20Q96IG2 436 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 TMX3Q96JJ7 454 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 TLR10Q9BXR5 811 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 CPNE5Q9HCH3 593 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 AASDHPPTQ9NRN7 309 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA9Q9Y5G4 932 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA8Q9Y5G5 932 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA7Q9Y5G6 932 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA6Q9Y5G7 932 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 PCDHGA3Q9Y5H0 932 aa3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ARHGEF17Q96PE2 2063 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-218ENST00000525745 ERICH3Q5RHP9 1530 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 INO80B-WBP1J3KQ70 363 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 GRM6O15303 877 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 NDUFS2O75306 463 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 AGFG2O95081 481 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 SLC6A4P31645 630 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 FOLR3P41439 243 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 ABCG1P45844 678 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 RECQLP46063 649 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 CTXN1P60606 82 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 KRT85P78386 507 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 NHLH1Q02575 133 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 FPGSQ05932 587 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 ODF1Q14990 250 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 PREPLQ4J6C6 727 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 KAZNQ674X7 775 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 TSHZ1Q6ZSZ6 1077 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 MIGA2Q7L4E1 593 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 GRASPQ7Z6J2 395 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 CLNKQ7Z7G1 428 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 DCBLD1Q8N8Z6 715 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 Q8NA96 180 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 TOR1AIP2Q8NFQ8 470 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 TFAP2BQ92481 460 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 UROC1Q96N76 676 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 SLC13A1Q9BZW2 595 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 INO80BQ9C086 356 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 ZNF277Q9NRM2 450 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 TDP1Q9NUW8 608 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 SAP30BPQ9UHR5 308 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 SMARCA4P51532 1647 aa3.41□□□□□ -1.86
ECHDC1-218ENST00000525745 PRAMEF33A0A0G2JMD5 474 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 A0A1W2PS29 197 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 PRAMEF10O60809 474 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 PROP1O75360 226 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 CHRM2P08172 466 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 SBK3P0C264 359 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 MTHFD1P11586 935 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 KCNA2P16389 499 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 GPD1P21695 349 aa3.4□□□□□ -1.87
ECHDC1-218ENST00000525745 NEK2P51955 445 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms