RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
ECHDC1-218ENST00000525745 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
ECHDC1-218ENST00000525745 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
ECHDC1-218ENST00000525745 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
ECHDC1-218ENST00000525745 FOXD1Q16676 465 aa13.84□□□□□ -0.19
ECHDC1-218ENST00000525745 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
ECHDC1-218ENST00000525745 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
ECHDC1-218ENST00000525745 ADRA2BP18089 450 aa13.05□□□□□ -0.32
ECHDC1-218ENST00000525745 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-218ENST00000525745 MSH5O43196 834 aa12.89□□□□□ -0.35
ECHDC1-218ENST00000525745 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
ECHDC1-218ENST00000525745 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-218ENST00000525745 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
ECHDC1-218ENST00000525745 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
ECHDC1-218ENST00000525745 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
ECHDC1-218ENST00000525745 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
ECHDC1-218ENST00000525745 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
ECHDC1-218ENST00000525745 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
ECHDC1-218ENST00000525745 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
ECHDC1-218ENST00000525745 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
ECHDC1-218ENST00000525745 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
ECHDC1-218ENST00000525745 KCNA4P22459 653 aa11.18□□□□□ -0.62
ECHDC1-218ENST00000525745 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
ECHDC1-218ENST00000525745 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
ECHDC1-218ENST00000525745 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
ECHDC1-218ENST00000525745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.668e-8■■■□□ 16.3
ECHDC1-218ENST00000525745 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
ECHDC1-218ENST00000525745 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
ECHDC1-218ENST00000525745 SLC4A2P04920 1241 aa10.68□□□□□ -0.7
ECHDC1-218ENST00000525745 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
ECHDC1-218ENST00000525745 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-218ENST00000525745 CAPN15O75808 1086 aa10.51□□□□□ -0.73
ECHDC1-218ENST00000525745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
ECHDC1-218ENST00000525745 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
ECHDC1-218ENST00000525745 APLP2Q06481 763 aa10.43□□□□□ -0.74
ECHDC1-218ENST00000525745 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-218ENST00000525745 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-218ENST00000525745 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
ECHDC1-218ENST00000525745 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
ECHDC1-218ENST00000525745 DSG3P32926 999 aa10.36□□□□□ -0.75
ECHDC1-218ENST00000525745 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-218ENST00000525745 ABCB7O75027 752 aa10.3□□□□□ -0.76
ECHDC1-218ENST00000525745 ZBTB22O15209 634 aa10.28□□□□□ -0.76
ECHDC1-218ENST00000525745 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-218ENST00000525745 POLA2Q14181 598 aa10.12□□□□□ -0.79
ECHDC1-218ENST00000525745 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
ECHDC1-218ENST00000525745 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
ECHDC1-218ENST00000525745 CSRNP3Q8WYN3 585 aa9.94□□□□□ -0.82
ECHDC1-218ENST00000525745 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-218ENST00000525745 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-218ENST00000525745 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
ECHDC1-218ENST00000525745 FBLN2P98095 1184 aa9.77□□□□□ -0.85
ECHDC1-218ENST00000525745 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
ECHDC1-218ENST00000525745 POTEHQ6S545 545 aa9.69□□□□□ -0.86
ECHDC1-218ENST00000525745 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-218ENST00000525745 CHRDL2Q6WN34 429 aa9.63□□□□□ -0.87
ECHDC1-218ENST00000525745 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
ECHDC1-218ENST00000525745 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
ECHDC1-218ENST00000525745 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
ECHDC1-218ENST00000525745 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-218ENST00000525745 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-218ENST00000525745 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
ECHDC1-218ENST00000525745 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
ECHDC1-218ENST00000525745 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
ECHDC1-218ENST00000525745 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
ECHDC1-218ENST00000525745 PABPN1Q86U42 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
ECHDC1-218ENST00000525745 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
ECHDC1-218ENST00000525745 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
ECHDC1-218ENST00000525745 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
ECHDC1-218ENST00000525745 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-218ENST00000525745 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
ECHDC1-218ENST00000525745 HAX1O00165 279 aa9.24□□□□□ -0.93
ECHDC1-218ENST00000525745 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
ECHDC1-218ENST00000525745 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
ECHDC1-218ENST00000525745 SP7Q8TDD2 431 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-218ENST00000525745 EVX2Q03828 476 aa9.1□□□□□ -0.95
ECHDC1-218ENST00000525745 FARP1Q9Y4F1 1045 aaPredicted RBP9.08□□□□□ -0.96
ECHDC1-218ENST00000525745 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
ECHDC1-218ENST00000525745 PROM2Q8N271 834 aa9.07□□□□□ -0.96
ECHDC1-218ENST00000525745 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
ECHDC1-218ENST00000525745 FKBP8Q14318 412 aa9.05□□□□□ -0.96
ECHDC1-218ENST00000525745 CD44P16070 742 aaKnown RBP9□□□□□ -0.97
ECHDC1-218ENST00000525745 GABBR2O75899 941 aa8.92□□□□□ -0.98
ECHDC1-218ENST00000525745 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
ECHDC1-218ENST00000525745 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
ECHDC1-218ENST00000525745 ZRANB1Q9UGI0 708 aa8.91□□□□□ -0.98
ECHDC1-218ENST00000525745 MIER1Q8N108 512 aa8.9□□□□□ -0.98
ECHDC1-218ENST00000525745 PLEKHG5O94827 1062 aa8.89□□□□□ -0.99
ECHDC1-218ENST00000525745 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-218ENST00000525745 PLCD3Q8N3E9 789 aa8.86□□□□□ -0.99
ECHDC1-218ENST00000525745 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-218ENST00000525745 CLCN6P51797 869 aa8.8□□□□□ -1
ECHDC1-218ENST00000525745 PHF12Q96QT6 1004 aa8.8□□□□□ -1
ECHDC1-218ENST00000525745 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
ECHDC1-218ENST00000525745 FBXO3Q9UK99 471 aa8.79□□□□□ -1
ECHDC1-218ENST00000525745 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-218ENST00000525745 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-218ENST00000525745 DCBLD2Q96PD2 775 aa8.74□□□□□ -1.01
ECHDC1-218ENST00000525745 RASEFQ8IZ41 740 aa8.73□□□□□ -1.01
ECHDC1-218ENST00000525745 POTEIP0CG38 1075 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1308 ms