RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MAPK13O15264 365 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-202ENST00000524773 SP4Q02446 784 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 CLUL1Q15846 466 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 HHATQ5VTY9 493 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 NLRP9Q7RTR0 991 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 CCDC125Q86Z20 511 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 NLGN1Q8N2Q7 840 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 STRA6Q9BX79 667 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ARMCX1Q9P291 453 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 SLC17A7Q9P2U7 560 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 A0A1B0GVG6 124 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-202ENST00000524773 POLR2MP0CAP2 368 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 DSG3P32926 999 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ARSEP51690 589 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 WNT7BP56706 349 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 PLCB3Q01970 1234 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 DGKZQ13574 1117 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 KPNB1Q14974 876 aaKnown RBP13.95□□□□□ -0.18
CAPN1-202ENST00000524773 CLEC16AQ2KHT3 1053 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 LRRC6Q86X45 466 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 C10orf82Q8WW14 230 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 PTPRN2Q92932 1015 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 ARL8BQ9NVJ2 186 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 NMRK1Q9NWW6 199 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
CAPN1-202ENST00000524773 TELO2Q9Y4R8 837 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
CAPN1-202ENST00000524773 RPL7AP62424 266 aaKnown RBP13.94□□□□□ -0.18
CAPN1-202ENST00000524773 RCN1Q15293 331 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 MCOLN2Q8IZK6 566 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 CCDC17Q96LX7 622 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 SMC6Q96SB8 1091 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 TMEM121Q9BTD3 319 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 GLIS2Q9BZE0 524 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-202ENST00000524773 EURLQ9NYK6 297 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 PI4KBQ9UBF8 816 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 EDF1O60869 148 aaKnown RBP13.94□□□□□ -0.18
CAPN1-202ENST00000524773 BBOX1O75936 387 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 MTA2O94776 668 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 SPARCL1Q14515 664 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 CCDC6Q16204 474 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 DENND1AQ8TEH3 1009 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 DNAJC9Q8WXX5 260 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
CAPN1-202ENST00000524773 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 UVRAGQ9P2Y5 699 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 LGALS13Q9UHV8 139 aa13.94□□□□□ -0.18
CAPN1-202ENST00000524773 YARSP54577 528 aaKnown RBP13.93□□□□□ -0.18
CAPN1-202ENST00000524773 PDIA2Q13087 525 aaKnown RBP13.93□□□□□ -0.18
CAPN1-202ENST00000524773 NFIL3Q16649 462 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 ARMC3Q5W041 872 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 ZNF75CPQ92670 426 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-202ENST00000524773 AGBL1Q96MI9 1066 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 SEL1LQ9UBV2 794 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 WASF2Q9Y6W5 498 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 C10orf71Q711Q0 1435 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 RARRES1P49788 294 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 STAT2P52630 851 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 TFDP1Q14186 410 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 RCN2Q14257 317 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 KRT39Q6A163 491 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 SLC9A9Q8IVB4 645 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 SCYL3Q8IZE3 742 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 FBXO27Q8NI29 283 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 FAM213AQ9BRX8 229 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 KCNH7Q9NS40 1196 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 STARD13Q9Y3M8 1113 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 LRRC42Q9Y546 428 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
CAPN1-202ENST00000524773 CNGA1P29973 690 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 HOXA10P31260 410 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 POLE2P56282 527 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 STAT4Q14765 748 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 MSS51Q4VC12 460 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 ZC3H18Q86VM9 953 aaKnown RBP13.92□□□□□ -0.18
CAPN1-202ENST00000524773 CPXCR1Q8N123 301 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 SHKBP1Q8TBC3 707 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 TEKT4Q8WW24 435 aa13.92□□□□□ -0.18
CAPN1-202ENST00000524773 TSC22D3Q99576 134 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms