RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 C8orf58Q8NAV2 365 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 DBF4BQ8NFT6 615 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 SHKBP1Q8TBC3 707 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 CAGE1Q8TC20 777 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
PABPC1-223ENST00000523636 RSPH1Q8WYR4 309 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 ERP27Q96DN0 273 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 HEXIM2Q96MH2 286 aaKnown RBP5.9□□□□□ -1.46
PABPC1-223ENST00000523636 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 GPR108Q9NPR9 543 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 TAGLN3Q9UI15 199 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
PABPC1-223ENST00000523636 IL16Q14005 1332 aa5.9□□□□□ -1.47
PABPC1-223ENST00000523636 OTOGQ6ZRI0 2925 aa5.9□□□□□ -1.47
PABPC1-223ENST00000523636 CELSR2Q9HCU4 2923 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 J3QKU1 62 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 TBC1D4O60343 1298 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 AMHP03971 560 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 MYL3P08590 195 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 WEE2P0C1S8 567 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 ZNF853P0CG23 659 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 RBP3P10745 1247 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 CASP2P42575 452 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 MCAMP43121 646 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 PHKA1P46020 1223 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 CNTN2Q02246 1040 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 TROAPQ12815 778 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
PABPC1-223ENST00000523636 RAB3GAP1Q15042 981 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 CSRP2Q16527 193 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 DUSP6Q16828 381 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 FAM47CQ5HY64 1035 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 CCDC70Q6NSX1 233 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 TSSK4Q6SA08 328 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 C6orf15Q6UXA7 325 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-223ENST00000523636 ATG9AQ7Z3C6 839 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 KRT77Q7Z794 578 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 SIAH1Q8IUQ4 282 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 PIWIL2Q8TC59 973 aaKnown RBP5.89□□□□□ -1.47
PABPC1-223ENST00000523636 POF1BQ8WVV4 589 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 KLHL6Q8WZ60 621 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 MYCBPQ99417 103 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-223ENST00000523636 RETREG1Q9H6L5 497 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 PRR13Q9NZ81 148 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 POLG2Q9UHN1 485 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 KCNH3Q9ULD8 1083 aa5.89□□□□□ -1.47
PABPC1-223ENST00000523636 ATG2BQ96BY7 2078 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 EIF4E1BA6NMX2 242 aaKnown RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 PRSS47A8MTI9 375 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 WDR64B1ANS9 1081 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 LRP3O75074 770 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 FLOT1O75955 427 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 DDAH1O94760 285 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 GJB6O95452 261 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 NAT2P11245 290 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 TDGF1P13385 188 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 STAT3P40763 770 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 TECP42680 631 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 CCR10P46092 362 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 CSTF1Q05048 431 aaKnown RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ALFQ53S48 1182 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZNF618Q5T7W0 954 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZNF605Q86T29 641 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 PPFIBP1Q86W92 1011 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZDHHC13Q8IUH4 622 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 FOXP4Q8IVH2 680 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 SPICE1Q8N0Z3 855 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 SHISA5Q8N114 240 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 FIBCD1Q8N539 461 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 TSPYL6Q8N831 410 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 LINS1Q8NG48 757 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZNF669Q96BR6 464 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZNF689Q96CS4 500 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 LRIG1Q96JA1 1093 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 NEK1Q96PY6 1258 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 EPN3Q9H201 632 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ZSCAN32Q9NX65 697 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 CLIC5Q9NZA1 410 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 FBXO4Q9UKT5 387 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 FLT1P17948 1338 aa5.88□□□□□ -1.47
PABPC1-223ENST00000523636 COL5A1P20908 1838 aaPredicted RBP5.88□□□□□ -1.47
PABPC1-223ENST00000523636 LOXHD1Q8IVV2 1947 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 PDZD2O15018 2839 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 C9IYK1 514 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 VWA5AO00534 786 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 ZEB2O60315 1214 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 RETP07949 1114 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 CT47B1P0C2W7 299 aaPredicted RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 GEMIN4P57678 1058 aaKnown RBP5.87□□□□□ -1.47
PABPC1-223ENST00000523636 ERVFC1P60507 584 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 MCL1Q07820 350 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 TDGQ13569 410 aa5.87□□□□□ -1.47
PABPC1-223ENST00000523636 AUHQ13825 339 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms