RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ABCB4P21439 1286 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 SSTR3P32745 418 aaPredicted RBP16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 GALCP54803 685 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 RBP5P82980 135 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 ZNF394Q53GI3 561 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 SMYD3Q9H7B4 428 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 CHST12Q9NRB3 414 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 ATICP31939 592 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 CDH8P55286 799 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 LPPQ93052 612 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 ZFP42Q96MM3 310 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
CTNNA1-236ENST00000522792 CTAGE9A4FU28 777 aa16.52■□□□□ 0.24
CTNNA1-236ENST00000522792 GNA15P30679 374 aa16.52■□□□□ 0.24
CTNNA1-236ENST00000522792 BPIFB4P59827 614 aa16.52■□□□□ 0.24
CTNNA1-236ENST00000522792 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.24
CTNNA1-236ENST00000522792 UBQLN1Q9UMX0 589 aaKnown RBP16.52■□□□□ 0.24
CTNNA1-236ENST00000522792 ENC1O14682 589 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 TACC1O75410 805 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 ITGA4P13612 1032 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 XKR4Q5GH76 650 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 NOX5Q96PH1 765 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 BCO2Q9BYV7 579 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 OGDHLQ9ULD0 1010 aa16.52■□□□□ 0.23
CTNNA1-236ENST00000522792 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 THAP12O43422 761 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 CAND2O75155 1236 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 FTLP02792 175 aaPredicted RBP16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 CFHP08603 1231 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 KCNE1P15382 129 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 MLH1P40692 756 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 CDK7P50613 346 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 ZNF132P52740 706 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 ORC1Q13415 861 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 PASD1Q8IV76 773 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 DNAJC5GQ8N7S2 189 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 THAP2Q9H0W7 228 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
CTNNA1-236ENST00000522792 PTGESO14684 152 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 NOP2P46087 812 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 TNNC1P63316 161 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 C9orf57Q5W0N0 161 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 FAM126BQ8IXS8 530 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 CTNNBL1Q8WYA6 563 aaPredicted RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ARHGEF26Q96DR7 871 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ALS2CR12Q96Q35 445 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 MMS19Q96T76 1030 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ADAM2Q99965 735 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ISCUQ9H1K1 167 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 INTUQ9ULD6 942 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 RTN2O75298 545 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 TMEM253P0C7T8 217 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 P4HA1P13674 534 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 AFF1P51825 1210 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 DSC3Q14574 896 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ZNF677Q86XU0 584 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 HACE1Q8IYU2 909 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 GAD1Q99259 594 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 HMGXB4Q9UGU5 601 aa16.5■□□□□ 0.23
CTNNA1-236ENST00000522792 ATP8B3O60423 1300 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 BTNL10A8MVZ5 291 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 PALMO75781 387 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 STAU1O95793 577 aaKnown RBP16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 CLEC16AQ2KHT3 1053 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
CTNNA1-236ENST00000522792 ANKRD62A6NC57 917 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 PQBP1O60828 265 aaKnown RBP16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 CD4P01730 458 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 CPA5Q8WXQ8 436 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 L2HGDHQ9H9P8 463 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 OSGEPQ9NPF4 335 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 CACNG4Q9UBN1 327 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 NCANO14594 1321 aa16.48■□□□□ 0.23
CTNNA1-236ENST00000522792 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms