RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 NOP14P78316 857 aaKnown RBP17.49■□□□□ 0.39
LSM1-204ENST00000522515 WDR72Q3MJ13 1102 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 DPY19L2P1Q6NXN4 242 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 TAF4BQ92750 862 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 TATDN2Q93075 761 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 COLEC11Q9BWP8 271 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 VRTNQ9H8Y1 702 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 NUB1Q9Y5A7 615 aa17.49■□□□□ 0.39
LSM1-204ENST00000522515 KPNA7A9QM74 516 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 I3L4J1 428 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 TPM3P06753 285 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 PBX1P40424 430 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 AARSP49588 968 aaKnown RBP eCLIP17.48■□□□□ 0.39
LSM1-204ENST00000522515 SV2CQ496J9 727 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 WDR44Q5JSH3 913 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 SLC39A11Q8N1S5 342 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 LSM14BQ9BX40 385 aaKnown RBP17.48■□□□□ 0.39
LSM1-204ENST00000522515 SIX2Q9NPC8 291 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
LSM1-204ENST00000522515 ADAM28Q9UKQ2 775 aa17.48■□□□□ 0.39
LSM1-204ENST00000522515 COLQQ9Y215 455 aaPredicted RBP17.48■□□□□ 0.39
LSM1-204ENST00000522515 A0A1W2PQC6 194 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 TADA2AO75478 443 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 ZNF75DP51815 510 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 PHLDB3Q6NSJ2 640 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 ARHGEF19Q8IW93 802 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 IGSF21Q96ID5 467 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 PCMTD1Q96MG8 357 aaPredicted RBP17.47■□□□□ 0.39
LSM1-204ENST00000522515 NT5C1BQ96P26 610 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 AAASQ9NRG9 546 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 POLIQ9UNA4 740 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 PCDHB12Q9Y5F1 795 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
LSM1-204ENST00000522515 TAP1Q03518 808 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 RAB30Q15771 203 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 GJB7Q6PEY0 223 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 C17orf80Q9BSJ5 609 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 NKX2-4Q9H2Z4 354 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 FAM207AQ9NSI2 230 aaPredicted RBP17.46■□□□□ 0.39
LSM1-204ENST00000522515 GDAP2Q9NXN4 497 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 SPG21Q9NZD8 308 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 APEX2Q9UBZ4 518 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 MSRAQ9UJ68 235 aa17.46■□□□□ 0.39
LSM1-204ENST00000522515 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.38
LSM1-204ENST00000522515 EPHB6O15197 1021 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 BMPR1AP36894 532 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 MRE11P49959 708 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 KLHDC7AQ5VTJ3 777 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 DSTYKQ6XUX3 929 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 RRAGAQ7L523 313 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 PPM1KQ8N3J5 372 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 SUSD3Q96L08 255 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 GPR62Q9BZJ7 368 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 NIF3L1Q9GZT8 377 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 PLCB1Q9NQ66 1216 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 A0A1W2PPC1 479 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 CARNS1A5YM72 827 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 M0QZQ0 153 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 CYB561D2O14569 222 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 NOL4O94818 638 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 ADCY5O95622 1261 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 EFEMP2O95967 443 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 PAX3P23760 479 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 CTNNB1P35222 781 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 PPM1AP35813 382 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 ASPAP45381 313 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 TNNC1P63316 161 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 FUT10Q6P4F1 479 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 SCARA5Q6ZMJ2 495 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 KAT5Q92993 513 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 TMEM169Q96HH4 297 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 MRFAP1L1Q96HT8 127 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 MMS19Q96T76 1030 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 ARID3AQ99856 593 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 VN1R3Q9BXE9 311 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 GANQ9H2C0 597 aa17.45■□□□□ 0.38
LSM1-204ENST00000522515 AJAP1Q9UKB5 411 aaPredicted RBP17.45■□□□□ 0.38
LSM1-204ENST00000522515 TRAPPC3O43617 180 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 FGF18O76093 207 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 DNAJB2P25686 324 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 CDH8P55286 799 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 SMAD3P84022 425 aaKnown RBP17.44■□□□□ 0.38
LSM1-204ENST00000522515 CUL2Q13617 745 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 SOWAHAQ2M3V2 549 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
LSM1-204ENST00000522515 TAS1R1Q7RTX1 841 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 VSTM4Q8IW00 320 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 NEK11Q8NG66 645 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 KREMEN1Q96MU8 473 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
LSM1-204ENST00000522515 BCO2Q9BYV7 579 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 SDCBP2Q9H190 292 aa17.44■□□□□ 0.38
LSM1-204ENST00000522515 SMYD3Q9H7B4 428 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms