RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DCDC2BA2VCK2 349 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 CXCL8P10145 99 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 CHRNB1P11230 501 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 HOXC13P31276 330 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 DMWDQ09019 674 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 STXBP5Q5T5C0 1151 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 IQCEQ6IPM2 695 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 TMC8Q8IU68 726 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 MFSD6LQ8IWD5 586 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 GPR161Q8N6U8 529 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 APPL2Q8NEU8 664 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 PGLYRP2Q96PD5 576 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 ASAH2Q9NR71 780 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 USP18Q9UMW8 372 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 YIPF1Q9Y548 306 aa16.67■□□□□ 0.26
TRAPPC9-213ENST00000522504 HEPACAM2A8MVW5 462 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 M0QZQ0 153 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 TOM1L1O75674 476 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 OAZ2O95190 189 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 CPB1P15086 417 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 CCNE1P24864 410 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 SOX9P48436 509 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 GUCY2FP51841 1108 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 LMNB2Q03252 620 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 NOLC1Q14978 699 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 ELMOD1Q8N336 334 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 DEPDC1BQ8WUY9 529 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 SPIRE2Q8WWL2 714 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 SECISBP2LQ93073 1101 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 RBM12Q9NTZ6 932 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 C2orf42Q9NWW7 574 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 MAFFQ9ULX9 164 aa16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-213ENST00000522504 TICRRQ7Z2Z1 1910 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 A0A1W2PRU2 124 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 PRR5-ARHGAP8B1AHC4 643 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZNF263O14978 683 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 GUCY2CP25092 1073 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 TNFSF9P41273 254 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 AARSP49588 968 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 ARHGAP8P85298 464 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 MCL1Q07820 350 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 SPEM2Q0P670 501 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 DUSP4Q13115 394 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 SRSF5Q13243 272 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 ZBTB6Q15916 424 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 KRT79Q5XKE5 535 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 TTC9BQ8N6N2 239 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 MKNK1Q9BUB5 465 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 C17orf75Q9HAS0 396 aa16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 CDV3Q9UKY7 258 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-213ENST00000522504 TTC26A0AVF1 554 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 PPEF2O14830 753 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 HRO43593 1189 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 SOAT2O75908 522 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 KRT37O76014 449 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 PLS3P13797 630 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 MARCKSP29966 332 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 LRPAP1P30533 357 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 CCR3P51677 355 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 YWHAHQ04917 246 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 STRN3Q13033 797 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 TXNDC11Q6PKC3 985 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 Q6ZS52 159 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 LEMD2Q8NC56 503 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 TMEM209Q96SK2 561 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 PLIN2Q99541 437 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 GMEB2Q9UKD1 530 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 SLC27A5Q9Y2P5 690 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
TRAPPC9-213ENST00000522504 SLC38A8A6NNN8 435 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CHURC1-FNTBB4DL54 471 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CLDN3O15551 220 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 SDHBP21912 280 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 PRPHP41219 470 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CXCL12P48061 93 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 FNTBP49356 437 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CDR1P51861 262 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 NRLP54845 237 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 FCHO2Q0JRZ9 810 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 LAIR1Q6GTX8 287 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 ZPBP2Q6X784 338 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 DTHD1Q6ZMT9 781 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 GAREM2Q75VX8 874 aa16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 CELF5Q8N6W0 485 aaKnown RBP16.63■□□□□ 0.25
TRAPPC9-213ENST00000522504 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms