RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ARPP19P56211 112 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 PIGHQ14442 188 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 KIF22Q14807 665 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 FSD1LQ9BXM9 530 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 OSBPL1AQ9BXW6 950 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 THAP2Q9H0W7 228 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 AGPAT3Q9NRZ7 376 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 GTSE1Q9NYZ3 720 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 ATMINO43313 823 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 NR3C2P08235 984 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 SETSIPP0DME0 302 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 PTENP60484 403 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 ACTR2P61160 394 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 TSTA3Q13630 321 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 TMEM143Q96AN5 459 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 RUSC1Q9BVN2 902 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 TTYH3Q9C0H2 523 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 CYP4F11Q9HBI6 524 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 ANLNQ9NQW6 1124 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 GTF3C4Q9UKN8 822 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 RBAK-RBAKDNI3L0D1 243 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 APOL1O14791 398 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 PRKCBP05771 671 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 PGM1P36871 562 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 MAGEA4P43358 317 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 AP1B1Q10567 949 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 MORF4L2Q15014 288 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 Q4G0T1 1027 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 EFHC2Q5JST6 749 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 TMTC4Q5T4D3 741 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 TWF2Q6IBS0 349 aaKnown RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 BTNL9Q6UXG8 535 aa14.54□□□□□ -0.08
SYNPO-205ENST00000522122 MRPL46Q9H2W6 279 aaKnown RBP14.54□□□□□ -0.08
SYNPO-205ENST00000522122 F5H423 210 aaPredicted RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 CAND2O75155 1236 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 AGGF1Q8N302 714 aaeCLIP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SERPINB12Q96P63 405 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 TRAF3IP3Q9Y228 551 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 KCPQ6ZWJ8 1503 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 DNAJC8O75937 253 aaPredicted RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SLC13A5Q86YT5 568 aaPredicted RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SPATA33Q96N06 139 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 PDGFRAP16234 1089 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ITGA8P53708 1063 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 HMGCS2P54868 508 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 CAPRIN2Q6IMN6 1127 aaKnown RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 NKX2-3Q8TAU0 364 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 MRPL40Q9NQ50 206 aaKnown RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ZFATQ9P243 1243 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 MSH4O15457 936 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 TRAPPC3O43617 180 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 APRTP07741 180 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
SYNPO-205ENST00000522122 COPB2P35606 906 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 COG2Q14746 738 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SGSM1Q2NKQ1 1148 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ITPRIPL1Q6GPH6 555 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ANO5Q75V66 913 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SLC26A7Q8TE54 656 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 ERP27Q96DN0 273 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 TSSK1BQ9BXA7 367 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 RAB6BQ9NRW1 208 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
SYNPO-205ENST00000522122 H3BRJ5 948 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 YWHAHQ04917 246 aaPredicted RBP14.52□□□□□ -0.08
SYNPO-205ENST00000522122 PLA2G4FQ68DD2 849 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 NRBF2Q96F24 287 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 KIF12Q96FN5 646 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 MCEEQ96PE7 176 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 TRIM15Q9C019 465 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.08
SYNPO-205ENST00000522122 LAMB4A4D0S4 1761 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 RGL2O15211 777 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 KCNN4O15554 427 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 POU5F1BQ06416 359 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 KCNMA1Q12791 1236 aa14.52□□□□□ -0.08
SYNPO-205ENST00000522122 AFF2P51816 1311 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 FOXN3O00409 490 aaPredicted RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 NVLO15381 856 aaKnown RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 STMN1P16949 149 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 ADORA2BP29275 332 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 RABGAP1LQ5R372 815 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 NPHS2Q9NP85 383 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 CHORDC1Q9UHD1 332 aaPredicted RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 CNOT7Q9UIV1 285 aaKnown RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 XPAP23025 273 aaPredicted RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 CENPCQ03188 943 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 MTMR2Q13614 643 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF572Q7Z3I7 529 aaPredicted RBP14.52□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF677Q86XU0 584 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 UBN1Q9NPG3 1134 aa14.52□□□□□ -0.09
SYNPO-205ENST00000522122 KCNH7Q9NS40 1196 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms