RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 HS6ST3Q8IZP7 471 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 ZSCAN18Q8TBC5 510 aaPredicted RBP16.23■□□□□ 0.19
PRKDC-204ENST00000521331 FAM3CQ92520 227 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 ZSWIM3Q96MP5 696 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 MMTAG2Q9BU76 263 aaKnown RBP16.23■□□□□ 0.19
PRKDC-204ENST00000521331 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 TUBGCP4Q9UGJ1 667 aa16.23■□□□□ 0.19
PRKDC-204ENST00000521331 PRR5-ARHGAP8B1AHC4 643 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 H0YCG3 227 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 M0QZQ0 153 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 ZNF263O14978 683 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 MOSPD3O75425 235 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 OAZ2O95190 189 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 SEC24BO95487 1268 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 CLTAP09496 248 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 MYL4P12829 197 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 CYP3A5P20815 502 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 LRPAP1P30533 357 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 CCR3P51677 355 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 MLLT6P55198 1093 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-204ENST00000521331 ARHGAP8P85298 464 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 LMNB2Q03252 620 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
PRKDC-204ENST00000521331 KYAT1Q16773 422 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 HYIQ5T013 277 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 RNF19BQ6ZMZ0 732 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 BEST2Q8NFU1 509 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 MSANTD3Q96H12 275 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
PRKDC-204ENST00000521331 GMEB2Q9UKD1 530 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 PIAS3Q9Y6X2 628 aa16.22■□□□□ 0.19
PRKDC-204ENST00000521331 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 XPOTO43592 962 aaKnown RBP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 CXCL8P10145 99 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 RAD51AP2Q09MP3 1159 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 SEZ6Q53EL9 994 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 C1orf228Q6PIY5 440 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 USP37Q86T82 979 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 SYT2Q8N9I0 419 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 TSPAN18Q96SJ8 248 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 LARSQ9P2J5 1176 aaKnown RBP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 RAB23Q9ULC3 237 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 UBQLN1Q9UMX0 589 aaKnown RBP16.21■□□□□ 0.19
PRKDC-204ENST00000521331 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 PATJQ8NI35 1801 aa16.21■□□□□ 0.19
PRKDC-204ENST00000521331 TTC26A0AVF1 554 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 OR6C75A6NL08 312 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 HEPACAM2A8MVW5 462 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 TDGF1P13385 188 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 SCP2P22307 547 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 VIPR2P41587 438 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 EPHB3P54753 998 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
PRKDC-204ENST00000521331 PPP2R3AQ06190 1150 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 TEAD2Q15562 447 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 KCNN1Q92952 543 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 BICD1Q96G01 975 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 LMAN1LQ9HAT1 526 aa16.2■□□□□ 0.18
PRKDC-204ENST00000521331 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 ARNTLO00327 626 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 CHADO15335 359 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 GJA1P17302 382 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 ALDH1A3P47895 512 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 NCKAP1LP55160 1127 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 GPR17Q13304 367 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 DSTYKQ6XUX3 929 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 CELF5Q8N6W0 485 aaKnown RBP16.19■□□□□ 0.18
PRKDC-204ENST00000521331 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 C8orf33Q9H7E9 229 aaPredicted RBP16.19■□□□□ 0.18
PRKDC-204ENST00000521331 CDV3Q9UKY7 258 aaKnown RBP16.19■□□□□ 0.18
PRKDC-204ENST00000521331 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 ASB3Q9Y575 518 aa16.19■□□□□ 0.18
PRKDC-204ENST00000521331 TIMM13Q9Y5L4 95 aaPredicted RBP16.19■□□□□ 0.18
PRKDC-204ENST00000521331 VNN2O95498 520 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 FGF19O95750 216 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 CHRNB1P11230 501 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 TYMPP19971 482 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 PAX3P23760 479 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 CCNE1P24864 410 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 CXCL12P48061 93 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 LIG4P49917 911 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 SPAG1Q07617 926 aa16.18■□□□□ 0.18
PRKDC-204ENST00000521331 DUSP4Q13115 394 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms