RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 AARSP49588 968 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDC2-205ENST00000520233 NOP14P78316 857 aaKnown RBP19.12■□□□□ 0.65
SDC2-205ENST00000520233 WDR72Q3MJ13 1102 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 ZNF667Q5HYK9 610 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 FAXDC2Q96IV6 333 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 NT5C1BQ96P26 610 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 APOBEC3GQ9HC16 384 aaKnown RBP19.12■□□□□ 0.65
SDC2-205ENST00000520233 PLCB1Q9NQ66 1216 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 SPG21Q9NZD8 308 aa19.12■□□□□ 0.65
SDC2-205ENST00000520233 CLSTN1O94985 981 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 BMPR1AP36894 532 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 PBX2P40425 430 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 ZNF75DP51815 510 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 SMAD3P84022 425 aaKnown RBP19.11■□□□□ 0.65
SDC2-205ENST00000520233 LRMPQ12912 555 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 SPOPLQ6IQ16 392 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 DPY19L2P1Q6NXN4 242 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 TMEM173Q86WV6 379 aaPredicted RBP19.11■□□□□ 0.65
SDC2-205ENST00000520233 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 IGSF21Q96ID5 467 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 PCMTD1Q96MG8 357 aaPredicted RBP19.11■□□□□ 0.65
SDC2-205ENST00000520233 SAMD11Q96NU1 681 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 LSM14BQ9BX40 385 aaKnown RBP19.11■□□□□ 0.65
SDC2-205ENST00000520233 SIX2Q9NPC8 291 aa19.11■□□□□ 0.65
SDC2-205ENST00000520233 M0QZQ0 153 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 TRAPPC3O43617 180 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 ARHGEF15O94989 841 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 P4HA1P13674 534 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 BRCC3P46736 316 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 KLK7P49862 253 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 MRE11P49959 708 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 TNNC1P63316 161 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 ELAVL2Q12926 359 aaKnown RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 TIGD5Q53EQ6 642 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 PRPF38BQ5VTL8 546 aaKnown RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 PHLDB3Q6NSJ2 640 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 FUT10Q6P4F1 479 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 DSTYKQ6XUX3 929 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 BCL7CQ8WUZ0 217 aaPredicted RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 TATDN2Q93075 761 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 ELMO3Q96BJ8 720 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 MRFAP1L1Q96HT8 127 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 SENP8Q96LD8 212 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 TGS1Q96RS0 853 aaKnown RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 PLVAPQ9BX97 442 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 NIF3L1Q9GZT8 377 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 NKX2-4Q9H2Z4 354 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDC2-205ENST00000520233 NXF1Q9UBU9 619 aaKnown RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 APEX2Q9UBZ4 518 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 COLQQ9Y215 455 aaPredicted RBP19.1■□□□□ 0.65
SDC2-205ENST00000520233 DAAM1Q9Y4D1 1078 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 SNX9Q9Y5X1 595 aa19.1■□□□□ 0.65
SDC2-205ENST00000520233 SF3B1O75533 1304 aaKnown RBP eCLIP19.09■□□□□ 0.65
SDC2-205ENST00000520233 C5orf67F2Z3F1 127 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 EFEMP2O95967 443 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 CTNNB1P35222 781 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 TAP1Q03518 808 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 LRIT3Q3SXY7 679 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 KLHDC7AQ5VTJ3 777 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 DPH6Q7L8W6 267 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 LIMS2Q7Z4I7 341 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 ARHGEF19Q8IW93 802 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 TMEM169Q96HH4 297 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 FAM81BQ96LP2 452 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 BCO2Q9BYV7 579 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 POLIQ9UNA4 740 aa19.09■□□□□ 0.65
SDC2-205ENST00000520233 ITIH6Q6UXX5 1313 aa19.08■□□□□ 0.65
SDC2-205ENST00000520233 ARHGEF37A1IGU5 675 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 CYB561D2O14569 222 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 HUS1O60921 280 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 RB1P06400 928 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 FAM163BP0C2L3 166 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 ODC1P11926 461 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 RFX1P22670 979 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 TBXAS1P24557 533 aaPredicted RBP19.08■□□□□ 0.64
SDC2-205ENST00000520233 ASPAP45381 313 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 ERVK-21P61565 698 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 PLCB3Q01970 1234 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 APBA1Q02410 837 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 GCNT1Q02742 428 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 PTPN21Q16825 1174 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 VSTM4Q8IW00 320 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 RNF168Q8IYW5 571 aaPredicted RBP19.08■□□□□ 0.64
SDC2-205ENST00000520233 PPM1KQ8N3J5 372 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 TOP6BLQ8N6T0 577 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 MMS19Q96T76 1030 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 C17orf80Q9BSJ5 609 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 GPR62Q9BZJ7 368 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 GANQ9H2C0 597 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 CYP3A43Q9HB55 503 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 FAM207AQ9NSI2 230 aaPredicted RBP19.08■□□□□ 0.64
SDC2-205ENST00000520233 STK39Q9UEW8 545 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 FBXL5Q9UKA1 691 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 PCDHB8Q9UN66 801 aa19.08■□□□□ 0.64
SDC2-205ENST00000520233 KIAA1671Q9BY89 1806 aa19.07■□□□□ 0.64
SDC2-205ENST00000520233 SCN1AP35498 2009 aa19.07■□□□□ 0.64
SDC2-205ENST00000520233 I3L4J1 428 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms