RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 ARHGAP20Q9P2F6 1191 aa18.26■□□□□ 0.51
TSNARE1-205ENST00000520166 TBKBP1A7MCY6 615 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 I3L4J1 428 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 PODXLO00592 558 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 CYP26A1O43174 497 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 ZC3H11AO75152 810 aaKnown RBP eCLIP18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 CYP3A5P20815 502 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 LRPAP1P30533 357 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 CLCN1P35523 988 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 PBX3P40426 434 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 FPGSQ05932 587 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 UPP1Q16831 310 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 SFMBT2Q5VUG0 894 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 RAD9BQ6WBX8 426 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 ZNF397Q8NF99 534 aaPredicted RBP18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 SHC3Q92529 594 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 BAG1Q99933 345 aaPredicted RBP18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 HMGXB4Q9UGU5 601 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 NME7Q9Y5B8 376 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 RANBP2P49792 3224 aaKnown RBP18.25■□□□□ 0.51
TSNARE1-205ENST00000520166 SOX5P35711 763 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 CDR1P51861 262 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 MFAP3P55082 362 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 LILRA4P59901 499 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 GCNT1Q02742 428 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 GRIK3Q13003 919 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 ZNF667Q5HYK9 610 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 TMEM240Q5SV17 173 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 RPUSD2Q8IZ73 545 aaKnown RBP18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 C17orf53Q8N3J3 647 aaPredicted RBP18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 UBR7Q8N806 425 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 TOP1MTQ969P6 601 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 IMPG2Q9BZV3 1241 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 NIF3L1Q9GZT8 377 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 AIPL1Q9NZN9 384 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 TDRD15B5MCY1 1934 aaKnown RBP18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
TSNARE1-205ENST00000520166 COL4A6Q14031 1691 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 ABHD14A-ACY1A0A1B0GW23 586 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 HNRNPH3P31942 346 aaKnown RBP18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 DSC1Q08554 894 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 MEA1Q16626 185 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 ZNF394Q53GI3 561 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 DNAAF5Q86Y56 855 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 NPAS4Q8IUM7 802 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 COLGALT2Q8IYK4 626 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 OLIG1Q8TAK6 271 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 TWNKQ96RR1 684 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 MMS19Q96T76 1030 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 LPIN3Q9BQK8 851 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 MRPL45Q9BRJ2 306 aaKnown RBP18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 NRDE2Q9H7Z3 1164 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 ZBBXA8MT70 800 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 DGKIO75912 1065 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 FGBP02675 491 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 KRT5P13647 590 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 FECHP22830 423 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 ATICP31939 592 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 STAT1P42224 750 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 BRCC3P46736 316 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 TUSC3Q13454 348 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 ASIC2Q16515 512 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 SOWAHAQ2M3V2 549 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 SLC47A2Q86VL8 602 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 FAM71AQ8IYT1 594 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 WHAMMQ8TF30 809 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 SLC20A1Q8WUM9 679 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 TSPAN18Q96SJ8 248 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 HTATIP2Q9BUP3 242 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 BCO2Q9BYV7 579 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 HAUS4Q9H6D7 363 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 VRTNQ9H8Y1 702 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 CISHQ9NSE2 258 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 PCDHB4Q9Y5E5 795 aa18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
TSNARE1-205ENST00000520166 PTPRSQ13332 1948 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 KPNA7A9QM74 516 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 NT5C1B-RDH14C9J2C7 533 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 XPOTO43592 962 aaKnown RBP18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 RNASELQ05823 741 aaKnown RBP18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 TMEM270Q6UE05 265 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 ZNF571Q7Z3V5 609 aaPredicted RBP18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 ABI1Q8IZP0 508 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 LRRC52Q8N7C0 313 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 TAF4BQ92750 862 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 IQCDQ96DY2 449 aa18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 PRG3Q9Y2Y8 225 aaPredicted RBP18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 R3HCC1Q9Y3T6 440 aaKnown RBP18.22■□□□□ 0.51
TSNARE1-205ENST00000520166 FNDC1Q4ZHG4 1894 aaPredicted RBP18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 A0A0U1RQJ8 604 aa18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 KIF4AO95239 1232 aa18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 CFHP08603 1231 aa18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 PTK2Q05397 1052 aa18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 MYO1EQ12965 1108 aa18.21■□□□□ 0.51
TSNARE1-205ENST00000520166 PPIGQ13427 754 aaKnown RBP eCLIP18.21■□□□□ 0.515e-7■■■□□ 18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms