RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 DENND3A2RUS2 1198 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 REXO4Q9GZR2 422 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 FAM192AQ9GZU8 254 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 EURLQ9NYK6 297 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 BLOC1S6Q9UL45 172 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 MAP3K4Q9Y6R4 1608 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 PP2D1A8MPX8 630 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ADORA2BP29275 332 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 CCT3P49368 545 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 NME3Q13232 169 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 SCUBE1Q8IWY4 988 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM35BQ8NCS4 154 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 OR6P1Q8NGX9 317 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 SDC4P31431 198 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 RECQLP46063 649 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 FAM160B2Q86V87 743 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ATP11CQ8NB49 1132 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ETS2P15036 469 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 NEDD8Q15843 81 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ERLEC1Q96DZ1 483 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ATAD3AQ9NVI7 634 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 GNA15P30679 374 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 DEPDC7Q96QD5 511 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 RPAP3Q9H6T3 665 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 ZBTB39O15060 712 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 FBXW4P57775 412 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 DCTN2Q13561 401 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 OSBPL8Q9BZF1 889 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 SP110Q9HB58 689 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM260Q9NX78 707 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 GPC3P51654 580 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 FAM102AQ5T9C2 384 aaPredicted RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 HEATR6Q6AI08 1181 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 SNRNP48Q6IEG0 339 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM110Q86TL2 294 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 RHPN2Q8IUC4 686 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 EGFL8Q99944 293 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 LXNQ9BS40 222 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 AFF4Q9UHB7 1163 aaKnown RBP9.11□□□□□ -0.95
CSMD1-206ENST00000520002 GMEB1Q9Y692 573 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 LAMC2Q13753 1193 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 CACNA1FO60840 1977 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 STK36Q9NRP7 1315 aa9.11□□□□□ -0.95
CSMD1-206ENST00000520002 TPST1O60507 370 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 NFKBIAP25963 317 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM179Q6ZVK1 233 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 PCDHGA3Q9Y5H0 932 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 ALDH5A1P51649 535 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 VAMP7P51809 220 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 MCPH1Q8NEM0 835 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 ANGPT2O15123 496 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 USP1O94782 785 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 BCL10O95999 233 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 ARSEP51690 589 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 SNPHO15079 494 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 ROR2Q01974 943 aaKnown RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 DNAJC3Q13217 504 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 LENG1Q96BZ8 264 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TRPC7Q9HCX4 862 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 KLHL18O94889 574 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 MAPK6Q16659 721 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TAS2R42Q7RTR8 314 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 GINS4Q9BRT9 223 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 STK39Q9UEW8 545 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 FAM95CA0A1B0GW59 222 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 PDZK1P1A8MUH7 402 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 IL12RB1P42701 662 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 WLSQ5T9L3 541 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 NDUFAF2Q8N183 169 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TMEM237Q96Q45 408 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 CELF4Q9BZC1 486 aaKnown RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 WNT8AQ9H1J5 351 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 FAM96AQ9H5X1 160 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 IQGAP3Q86VI3 1631 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 KPNA4O00629 521 aaPredicted RBP9.1□□□□□ -0.95
CSMD1-206ENST00000520002 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 GSNP06396 782 aa9.1□□□□□ -0.95
CSMD1-206ENST00000520002 TBXAS1P24557 533 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms