RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 TREHO43280 583 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 ITGB3P05106 788 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
FAM49B-214ENST00000519540 RRM1P23921 792 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 SSTR3P32745 418 aaPredicted RBP19.7■□□□□ 0.74
FAM49B-214ENST00000519540 PCBP1Q15365 356 aaKnown RBP eCLIP19.7■□□□□ 0.744e-6■■■■■ 36.2
FAM49B-214ENST00000519540 DCAF4L1Q3SXM0 396 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 ZNF667Q5HYK9 610 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 SCARA5Q6ZMJ2 495 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 PHF13Q86YI8 300 aaPredicted RBP19.7■□□□□ 0.74
FAM49B-214ENST00000519540 ALG3Q92685 438 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 KRT12Q99456 494 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 ARHGAP39Q9C0H5 1083 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 STIM2Q9P246 746 aa19.7■□□□□ 0.74
FAM49B-214ENST00000519540 DUSP11O75319 330 aaKnown RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 PSMC4P43686 418 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 FCGRTP55899 365 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 TNNC1P63316 161 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 ZNF200P98182 395 aaPredicted RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 PURAQ00577 322 aaKnown RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 TMEM132DQ14C87 1099 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 WDR72Q3MJ13 1102 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 ZNF394Q53GI3 561 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 CD101Q93033 1021 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 VCPIP1Q96JH7 1222 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 HINFPQ9BQA5 517 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 C2CD2Q9Y426 696 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 MAP2K7O14733 419 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 NPTXRO95502 500 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 EIF4BP23588 611 aaKnown RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 ATICP31939 592 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 YWHAEP62258 255 aaKnown RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 PPP1R2P3Q6NXS1 205 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 SLC27A1Q6PCB7 646 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 APBB1IPQ7Z5R6 666 aaPredicted RBP19.69■□□□□ 0.74
FAM49B-214ENST00000519540 CD302Q8IX05 232 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 UBL4BQ8N7F7 174 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 KRT35Q92764 455 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 ZSWIM1Q9BR11 485 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 AP1M1Q9BXS5 423 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 WNT8AQ9H1J5 351 aa19.69■□□□□ 0.74
FAM49B-214ENST00000519540 TMEM88BA6NKF7 163 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 PEX5P50542 639 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 MAP9Q49MG5 647 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 C2CD6Q53TS8 623 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 HDXQ7Z353 690 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 RNPC3Q96LT9 517 aaKnown RBP19.68■□□□□ 0.74
FAM49B-214ENST00000519540 VRTNQ9H8Y1 702 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 ADAM22Q9P0K1 906 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 TRIP12Q14669 1992 aaPredicted RBP19.68■□□□□ 0.74
FAM49B-214ENST00000519540 C17orf102A2RUQ5 167 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 KRIT1O00522 736 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 FGGP02679 453 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 MYBL2P10244 700 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 BRD2P25440 801 aaKnown RBP19.68■□□□□ 0.74
FAM49B-214ENST00000519540 HOXC8P31273 242 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 CBX1P83916 185 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 PTP4A2Q12974 167 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 LIN9Q5TKA1 542 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 KLHL7Q8IXQ5 586 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 KRT222Q8N1A0 295 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 TRIB2Q92519 343 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 C11orf70Q9BRQ4 267 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 ANAPC7Q9UJX3 599 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 CITO14578 2027 aa19.68■□□□□ 0.74
FAM49B-214ENST00000519540 MYADML2A6NDP7 307 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 CCDC188H7C350 402 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 CYBAP13498 195 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 PLA2G4AP47712 749 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 MARCKSL1P49006 195 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 LACTBP83111 547 aaPredicted RBP19.67■□□□□ 0.74
FAM49B-214ENST00000519540 C1QBPQ07021 282 aaKnown RBP19.67■□□□□ 0.74
FAM49B-214ENST00000519540 ZNF211Q13398 564 aaPredicted RBP19.67■□□□□ 0.74
FAM49B-214ENST00000519540 LLGL2Q6P1M3 1020 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 NOTUMQ6P988 496 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 PHLDB2Q86SQ0 1253 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 CPNE8Q86YQ8 564 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 SMC1BQ8NDV3 1235 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 TMEM40Q8WWA1 233 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 TFAP2BQ92481 460 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 EIF2AQ9BY44 585 aaKnown RBP19.67■□□□□ 0.74
FAM49B-214ENST00000519540 SDCBP2Q9H190 292 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 PLEKHA5Q9HAU0 1116 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 DPP3Q9NY33 737 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 ITGA11Q9UKX5 1188 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 AGAP1Q9UPQ3 857 aa19.67■□□□□ 0.74
FAM49B-214ENST00000519540 SPOPO43791 374 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 KPNA6O60684 536 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 LSM8O95777 96 aaKnown RBP19.66■□□□□ 0.74
FAM49B-214ENST00000519540 GLI1P08151 1106 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 C6orf222P0C671 652 aaPredicted RBP19.66■□□□□ 0.74
FAM49B-214ENST00000519540 GNAT1P11488 350 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 ITGA4P13612 1032 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 CTNNA2P26232 953 aa19.66■□□□□ 0.74
FAM49B-214ENST00000519540 POLR2BP30876 1174 aaKnown RBP19.66■□□□□ 0.74
FAM49B-214ENST00000519540 CTNNA1P35221 906 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms