RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SNX27Q96L92 541 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 TRIM6Q9C030 488 aaPredicted RBP24.98■■□□□ 1.59
SLIT3-204ENST00000518140 SDCBP2Q9H190 292 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 C2CD2Q9Y426 696 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 AXLP30530 894 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 GLRA4Q5JXX5 417 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 ACAD10Q6JQN1 1059 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 CREG2Q8IUH2 290 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 CEP112Q8N8E3 955 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 CYFIP2Q96F07 1278 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 ZSWIM1Q9BR11 485 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 KLK14Q9P0G3 267 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 BUB1BO60566 1050 aaPredicted RBP24.97■■□□□ 1.59
SLIT3-204ENST00000518140 RECQL4O94761 1208 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 UNGP13051 313 aaPredicted RBP24.97■■□□□ 1.59
SLIT3-204ENST00000518140 GPC5P78333 572 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 ALKAL1Q6UXT8 129 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 PASD1Q8IV76 773 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 PXYLP1Q8TE99 480 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 UBXN4Q92575 508 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 TSKSQ9UJT2 592 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 HYOU1Q9Y4L1 999 aa24.97■■□□□ 1.59
SLIT3-204ENST00000518140 TRIP11Q15643 1979 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 INHAP05111 366 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF667Q5HYK9 610 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 SLFN11Q7Z7L1 901 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 C18orf25Q96B23 403 aaPredicted RBP24.96■■□□□ 1.59
SLIT3-204ENST00000518140 SMYD3Q9H7B4 428 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 PLEKHA5Q9HAU0 1116 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 SMARCAL1Q9NZC9 954 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 TRPV2Q9Y5S1 764 aa24.96■■□□□ 1.59
SLIT3-204ENST00000518140 THSD7BQ9C0I4 1608 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 CITO14578 2027 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 THAP12O43422 761 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 FKTNO75072 461 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 PRLRP16471 622 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 PTGISQ16647 500 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 IFI16Q16666 785 aaKnown RBP24.95■■□□□ 1.59
SLIT3-204ENST00000518140 C2CD6Q53TS8 623 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 TEX35Q5T0J7 233 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 APBB1IPQ7Z5R6 666 aaPredicted RBP24.95■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF677Q86XU0 584 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 TAF4BQ92750 862 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 HPDLQ96IR7 371 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 EHD2Q9NZN4 543 aa24.95■■□□□ 1.59
SLIT3-204ENST00000518140 PPEF2O14830 753 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 ACLYP53396 1101 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 ZBTB6Q15916 424 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 NAA35Q5VZE5 725 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 LHX8Q68G74 356 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 SESTD1Q86VW0 696 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 CD302Q8IX05 232 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 PCSK9Q8NBP7 692 aaKnown RBP24.95■■□□□ 1.58
SLIT3-204ENST00000518140 SMG8Q8ND04 991 aaKnown RBP24.95■■□□□ 1.58
SLIT3-204ENST00000518140 ZNF606Q8WXB4 792 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 BCO2Q9BYV7 579 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 SENP6Q9GZR1 1112 aaPredicted RBP24.95■■□□□ 1.58
SLIT3-204ENST00000518140 TRMT13Q9NUP7 481 aaKnown RBP24.95■■□□□ 1.58
SLIT3-204ENST00000518140 TUBGCP4Q9UGJ1 667 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 ST3GAL5Q9UNP4 418 aa24.95■■□□□ 1.58
SLIT3-204ENST00000518140 CYP1A1P04798 512 aaPredicted RBP24.94■■□□□ 1.58
SLIT3-204ENST00000518140 CLCN6P51797 869 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 YARSP54577 528 aaKnown RBP24.94■■□□□ 1.58
SLIT3-204ENST00000518140 PHLDB2Q86SQ0 1253 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 DAAM2Q86T65 1068 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 ARRDC4Q8NCT1 418 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 CTTNBP2NLQ9P2B4 639 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 ITGA11Q9UKX5 1188 aa24.94■■□□□ 1.58
SLIT3-204ENST00000518140 BRD2P25440 801 aaKnown RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 THPOP40225 353 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 RBP5P82980 135 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 MGAT3Q09327 533 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 ORC1Q13415 861 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 ITGA7Q13683 1181 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 RNF180Q86T96 592 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 RSPH3Q86UC2 560 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 NOA1Q8NC60 698 aaKnown RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 TFAP2BQ92481 460 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 MS4A14Q96JA4 679 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 STXBP5LQ9Y2K9 1186 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 IPPQ9Y573 584 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 CTAGE15A4D2H0 777 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 M0QZ92 97 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 CTAGE8P0CG41 777 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 NFX1Q12986 1120 aaKnown RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 TWF2Q6IBS0 349 aaKnown RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 LLGL2Q6P1M3 1020 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 CTAGE6Q86UF2 777 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 NT5DC4Q86YG4 428 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 CTAGE4Q8IX94 777 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 AGO3Q9H9G7 860 aaKnown RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 ARGLU1Q9NWB6 273 aaPredicted RBP24.93■■□□□ 1.58
SLIT3-204ENST00000518140 PARP2Q9UGN5 583 aa24.93■■□□□ 1.58
SLIT3-204ENST00000518140 RPS6KA5O75582 802 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 GNRH1P01148 92 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 TCP1P17987 556 aaKnown RBP24.92■■□□□ 1.58
SLIT3-204ENST00000518140 ATICP31939 592 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 NT5DC3Q86UY8 548 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 GOLGA1Q92805 767 aa24.92■■□□□ 1.58
SLIT3-204ENST00000518140 ZNF653Q96CK0 615 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms