RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RUSC1Q9BVN2 902 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SEZ6LQ9BYH1 1024 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SENP6Q9GZR1 1112 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 ZMYND12Q9H0C1 365 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 CD248Q9HCU0 757 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 VTA1Q9NP79 307 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 NLRC4Q9NPP4 1024 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SH3GLB2Q9NR46 395 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GJB4Q9NTQ9 266 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 KLHL11Q9NVR0 708 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 KCNK4Q9NYG8 393 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GMIPQ9P107 970 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SUCOQ9UBS9 1254 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 NID2Q14112 1375 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PTPRFP10586 1907 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 MYH4Q9Y623 1939 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 LOC100289279A0A1B0GTE1 492 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 CHURC1-FNTBB4DL54 471 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ADAMTS3O15072 1205 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ZEB2O60315 1214 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 LILRB5O75023 590 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 DUSP11O75319 330 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 FARP2O94887 1054 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 SETSIPP0DME0 302 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 FDPSP14324 419 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 CPEP16870 476 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 JUNBP17275 347 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 PTGS1P23219 599 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 EDNRBP24530 442 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 KRT2P35908 639 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 MAPK9P45984 424 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ARL4DP49703 201 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 BEX3Q00994 111 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SP4Q02446 784 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GBX1Q14549 363 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 KCNA10Q16322 511 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 DUSP28Q4G0W2 176 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TMEM63BQ5T3F8 832 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 HEATR6Q6AI08 1181 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 MCTP2Q6DN12 878 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 FAM180BQ6P0A1 224 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TLK2Q86UE8 772 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 HSCBQ8IWL3 235 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 FAM186BQ8IYM0 893 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 OR6J1Q8NGC5 347 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 IL31RAQ8NI17 732 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 DIS3LQ8TF46 1054 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 SCFD2Q8WU76 684 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 DPF3Q92784 378 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 COPS5Q92905 334 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TBC1D20Q96BZ9 403 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 CLIP3Q96DZ5 547 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PAWRQ96IZ0 340 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 C8orf76Q96K31 380 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 UIMC1Q96RL1 719 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PHF20Q9BVI0 1012 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 C11orf49Q9H6J7 331 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 MLXIPQ9HAP2 919 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 OGDHLQ9ULD0 1010 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SMC3Q9UQE7 1217 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 HTTP42858 3142 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ZSWIM8A7E2V4 1837 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ESYT2A0FGR8 921 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 BTBD18B2RXH4 712 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 H3BQV1 296 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 J3KRW8 73 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 NOP56O00567 594 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 NEMP1O14524 444 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 TNFRSF10CO14798 259 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PLD2O14939 933 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 NKRFO15226 690 aaKnown RBP eCLIP3.06□□□□□ -1.92
SKP1-204ENST00000517691 ADCY6O43306 1168 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 DEAF1O75398 565 aaPredicted RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 STAM2O75886 525 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 FBXO21O94952 628 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 INMTO95050 263 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ARIH2O95376 493 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 GGPS1O95749 300 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 GH1P01241 217 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PYGLP06737 847 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 MYBP10242 640 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 NID1P14543 1247 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ITGB5P18084 799 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 PLCG1P19174 1290 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 GJB2P29033 226 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 OAS2P29728 719 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 TSPAN7P41732 249 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 CLK1P49759 484 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 CPT1AP50416 773 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 GJA9P57773 515 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 NLRP12P59046 1061 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 MRPS9P82933 396 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 HMGN5P82970 282 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 GHRHRQ02643 423 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 ST3GAL1Q11201 340 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 NONOQ15233 471 aaKnown RBP eCLIP3.06□□□□□ -1.92
SKP1-204ENST00000517691 FSCN1Q16658 493 aaKnown RBP3.06□□□□□ -1.92
SKP1-204ENST00000517691 PRR16Q569H4 304 aa3.06□□□□□ -1.92
SKP1-204ENST00000517691 YOD1Q5VVQ6 348 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms