RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MIGA2Q7L4E1 593 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 RHOT1Q8IXI2 618 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 DCBLD1Q8N8Z6 715 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 TFAP2BQ92481 460 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 SMG7Q92540 1137 aaKnown RBP5.25□□□□□ -1.57
LINC01088-211ENST00000515597 C11orf54Q9H0W9 315 aaPredicted RBP5.25□□□□□ -1.57
LINC01088-211ENST00000515597 VSX1Q9NZR4 365 aaPredicted RBP5.25□□□□□ -1.57
LINC01088-211ENST00000515597 CDYLQ9Y232 598 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHGA9Q9Y5G4 932 aaKnown RBP5.25□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHGA7Q9Y5G6 932 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHGA6Q9Y5G7 932 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
LINC01088-211ENST00000515597 KLHL33A6NCF5 533 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 GABRDO14764 452 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 SGTAO43765 313 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 CREMQ03060 361 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 TARDBPQ13148 414 aaKnown RBP eCLIP5.24□□□□□ -1.575e-7■■■■■ 30.3
LINC01088-211ENST00000515597 ATP2B3Q16720 1220 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 ABCB5Q2M3G0 1257 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 TSTD2Q5T7W7 516 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 KIAA0895LQ68EN5 471 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 TSHZ1Q6ZSZ6 1077 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 PRPF38AQ8NAV1 312 aaKnown RBP5.24□□□□□ -1.57
LINC01088-211ENST00000515597 NLGN4YQ8NFZ3 816 aaPredicted RBP5.24□□□□□ -1.57
LINC01088-211ENST00000515597 SLC30A5Q8TAD4 765 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 DDB2Q92466 427 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 LPIN2Q92539 896 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 ANKS1AQ92625 1134 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 HDAC10Q969S8 669 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 FBXL20Q96IG2 436 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 IPPQ9Y573 584 aa5.24□□□□□ -1.57
LINC01088-211ENST00000515597 SHTN1A0MZ66 631 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 WIPF3A6NGB9 483 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 MANSC4A6NHS7 340 aaPredicted RBP5.23□□□□□ -1.57
LINC01088-211ENST00000515597 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ALG1L2C9J202 215 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 HTRA2O43464 458 aaPredicted RBP5.23□□□□□ -1.57
LINC01088-211ENST00000515597 HAUS5O94927 633 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ELFN1P0C7U0 828 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 MYBL2P10244 700 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 GPD1P21695 349 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ZNF81P51508 661 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ITKQ08881 620 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ACAP2Q15057 778 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 KAZNQ674X7 775 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 GRASPQ7Z6J2 395 aaPredicted RBP5.23□□□□□ -1.57
LINC01088-211ENST00000515597 AMIGO2Q86SJ2 522 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 IFI44Q8TCB0 444 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 SCARB1Q8WTV0 552 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 SARAFQ96BY9 339 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 TEKT5Q96M29 485 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ZNF778Q96MU6 729 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 TDP1Q9NUW8 608 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 ENTPD2Q9Y5L3 495 aa5.23□□□□□ -1.57
LINC01088-211ENST00000515597 A0A1W2PS29 197 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 MPPED1O15442 326 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 XPOTO43592 962 aaKnown RBP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 AGFG2O95081 481 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 SBK3P0C264 359 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 SRGNP10124 158 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 EDNRBP24530 442 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 EXOSC10Q01780 885 aaKnown RBP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 PCBP2Q15366 365 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 CD300EQ496F6 205 aaPredicted RBP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 TOR1AIP2Q8NFQ8 470 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 DPF1Q92782 380 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 COA7Q96BR5 231 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 MTMR8Q96EF0 704 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 TMX3Q96JJ7 454 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 MRGPRX4Q96LA9 322 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 SLC13A1Q9BZW2 595 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 CCDC8Q9H0W5 538 aaPredicted RBP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.22□□□□□ -1.57
LINC01088-211ENST00000515597 LIMCH1Q9UPQ0 1083 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 PCDHA13Q9Y5I0 950 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 MRFAP1Q9Y605 127 aa5.22□□□□□ -1.57
LINC01088-211ENST00000515597 PRAMEF33A0A0G2JMD5 474 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 ADM5C9JUS6 153 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 PROM1O43490 865 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 ORC4O43929 436 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 PRAMEF10O60809 474 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 KATNA1O75449 491 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 CHRM2P08172 466 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 KCNA2P16389 499 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 ITGB6P18564 788 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 GATA3P23771 443 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 GRIA3P42263 894 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 MC2RQ01718 297 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 RAB39AQ14964 217 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 C3orf36Q3SXR2 165 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 PABPC1LQ4VXU2 614 aaKnown RBP5.21□□□□□ -1.58
LINC01088-211ENST00000515597 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 RSPH3Q86UC2 560 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 IL17RDQ8NFM7 739 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 TIMP4Q99727 224 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 KMT5AQ9NQR1 393 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 CTTNBP2NLQ9P2B4 639 aa5.21□□□□□ -1.58
LINC01088-211ENST00000515597 WASHC2CQ9Y4E1 1318 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms