RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 KLHL10Q6JEL2 608 aa28.01■■■□□ 2.07
DDR1-279ENST00000515529 TMEM184AQ6ZMB5 413 aa28.01■■■□□ 2.07
DDR1-279ENST00000515529 OR5B17Q8NGF7 314 aa28.01■■■□□ 2.07
DDR1-279ENST00000515529 MTRRQ9UBK8 725 aa28.01■■■□□ 2.07
DDR1-279ENST00000515529 MAPK13O15264 365 aa28■■■□□ 2.07
DDR1-279ENST00000515529 EPCAMP16422 314 aa28■■■□□ 2.07
DDR1-279ENST00000515529 CCNE1P24864 410 aa28■■■□□ 2.07
DDR1-279ENST00000515529 PSMC2P35998 433 aaKnown RBP28■■■□□ 2.07
DDR1-279ENST00000515529 LRRC63Q05C16 580 aa28■■■□□ 2.07
DDR1-279ENST00000515529 DLX2Q07687 328 aaPredicted RBP28■■■□□ 2.07
DDR1-279ENST00000515529 BFSP1Q12934 665 aa28■■■□□ 2.07
DDR1-279ENST00000515529 PUS10Q3MIT2 529 aaKnown RBP28■■■□□ 2.07
DDR1-279ENST00000515529 ZNF280DQ6N043 979 aa28■■■□□ 2.07
DDR1-279ENST00000515529 PALB2Q86YC2 1186 aa28■■■□□ 2.07
DDR1-279ENST00000515529 FAM186BQ8IYM0 893 aa28■■■□□ 2.07
DDR1-279ENST00000515529 LRRC52Q8N7C0 313 aa28■■■□□ 2.07
DDR1-279ENST00000515529 SLC22A17Q8WUG5 538 aa28■■■□□ 2.07
DDR1-279ENST00000515529 FAM84AQ96KN4 292 aa28■■■□□ 2.07
DDR1-279ENST00000515529 SENP8Q96LD8 212 aa28■■■□□ 2.07
DDR1-279ENST00000515529 POP1Q99575 1024 aaKnown RBP28■■■□□ 2.07
DDR1-279ENST00000515529 FAM50BQ9Y247 325 aa28■■■□□ 2.07
DDR1-279ENST00000515529 BACE2Q9Y5Z0 518 aa28■■■□□ 2.07
DDR1-279ENST00000515529 EYSQ5T1H1 3165 aa28■■■□□ 2.07
DDR1-279ENST00000515529 PTPRJQ12913 1337 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 PHACTR2O75167 634 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 MBD3O95983 291 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 EPB41P11171 864 aaKnown RBP27.99■■■□□ 2.07
DDR1-279ENST00000515529 AP3M2P53677 418 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 YWHAHQ04917 246 aaPredicted RBP27.99■■■□□ 2.07
DDR1-279ENST00000515529 MYO1EQ12965 1108 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 KCNC3Q14003 757 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 CTXN3Q4LDR2 81 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 ANKRD54Q6NXT1 300 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 ASB2Q96Q27 587 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 CLEC1BQ9P126 229 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 DSEQ9UL01 958 aa27.99■■■□□ 2.07
DDR1-279ENST00000515529 BICDL2A1A5D9 508 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 KPNA7A9QM74 516 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 SPTLC1O15269 473 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 HOXB8P17481 243 aaPredicted RBP27.98■■■□□ 2.07
DDR1-279ENST00000515529 TYMPP19971 482 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 OR1D2P34982 312 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 FKBP3Q00688 224 aaKnown RBP27.98■■■□□ 2.07
DDR1-279ENST00000515529 BIRC3Q13489 604 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 ANKRD40Q6AI12 368 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 INTS8Q75QN2 995 aaKnown RBP27.98■■■□□ 2.07
DDR1-279ENST00000515529 TRAPPC11Q7Z392 1133 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 METTL23Q86XA0 190 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 TMC2Q8TDI7 906 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 PARD3BQ8TEW8 1205 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 NELFBQ8WX92 580 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 CLSTN3Q9BQT9 956 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 TIMM13Q9Y5L4 95 aaPredicted RBP27.98■■■□□ 2.07
DDR1-279ENST00000515529 CDY1Q9Y6F8 540 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 BRWD1Q9NSI6 2320 aa27.98■■■□□ 2.07
DDR1-279ENST00000515529 CYB561D2O14569 222 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 AKAP3O75969 853 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 CLSTN1O94985 981 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 CD44P16070 742 aaKnown RBP27.97■■■□□ 2.07
DDR1-279ENST00000515529 BMP6P22004 513 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 TRPC3Q13507 836 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 SIX4Q9UIU6 781 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 CTNND2Q9UQB3 1225 aa27.97■■■□□ 2.07
DDR1-279ENST00000515529 VWA8A3KMH1 1905 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 TRIM49BA6NDI0 452 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 LRRIQ3A6PVS8 624 aaPredicted RBP27.96■■■□□ 2.07
DDR1-279ENST00000515529 PPP1R3GB7ZBB8 358 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 TGM5O43548 720 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 C1RP00736 705 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 KCNQ1P51787 676 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 VAMP7P51809 220 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 OVOS1Q6IE37 1185 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 PTCRAQ6ISU1 281 aaPredicted RBP27.96■■■□□ 2.07
DDR1-279ENST00000515529 GPT2Q8TD30 523 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 MSLNLQ96KJ4 702 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 MKNK1Q9BUB5 465 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 OXCT2Q9BYC2 517 aaPredicted RBP27.96■■■□□ 2.07
DDR1-279ENST00000515529 MAN1C1Q9NR34 630 aa27.96■■■□□ 2.07
DDR1-279ENST00000515529 PMS1P54277 932 aaKnown RBP27.95■■■□□ 2.06
DDR1-279ENST00000515529 ARPP19P56211 112 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 PAK1Q13153 545 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 SMAD4Q13485 552 aaKnown RBP27.95■■■□□ 2.06
DDR1-279ENST00000515529 TJAP1Q5JTD0 557 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 PLEKHO2Q8TD55 490 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 EEF2KMTQ96G04 330 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 HPDLQ96IR7 371 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 APOL5Q9BWW9 433 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 PLEKHA4Q9H4M7 779 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 FBXL5Q9UKA1 691 aa27.95■■■□□ 2.06
DDR1-279ENST00000515529 SLC16A3O15427 465 aaKnown RBP27.94■■■□□ 2.06
DDR1-279ENST00000515529 HUS1O60921 280 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 SPATA31D3P0C874 917 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 RAB33AQ14088 237 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 MRPL58Q14197 206 aaKnown RBP27.94■■■□□ 2.06
DDR1-279ENST00000515529 LIN9Q5TKA1 542 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 CES5AQ6NT32 575 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 SPATA31D4Q6ZUB0 917 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 KREMEN2Q8NCW0 462 aa27.94■■■□□ 2.06
DDR1-279ENST00000515529 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.94■■■□□ 2.06
DDR1-279ENST00000515529 HDAC7Q8WUI4 952 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms