RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 EXTL3O43909 919 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 GARTP22102 1010 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ELF1P32519 619 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 SYKP43405 635 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 EHHADHQ08426 723 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 STK4Q13043 487 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 PTPN21Q16825 1174 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 SLC8B1Q6J4K2 584 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ELMSAN1Q6PJG2 1045 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 RNF19BQ6ZMZ0 732 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 BRSK2Q8IWQ3 736 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 FSIP1Q8NA03 581 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ZNF461Q8TAF7 563 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ITFG1Q8TB96 612 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
VCAN-212ENST00000515397 PYM1Q9BRP8 204 aaKnown RBP12.44□□□□□ -0.42
VCAN-212ENST00000515397 ZDHHC7Q9NXF8 308 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 HSPBP1Q9NZL4 362 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 DNMT3BQ9UBC3 853 aaKnown RBP12.44□□□□□ -0.42
VCAN-212ENST00000515397 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 HPSEQ9Y251 543 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 PTPRJQ12913 1337 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 TMEM221A6NGB7 291 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 M0R296 226 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
VCAN-212ENST00000515397 CYB561D2O14569 222 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 PRRG1O14668 218 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 ABLIM3O94929 683 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 VNN2O95498 520 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
VCAN-212ENST00000515397 CPB1P15086 417 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 FSHRP23945 695 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
VCAN-212ENST00000515397 AARSP49588 968 aaKnown RBP eCLIP12.43□□□□□ -0.42
VCAN-212ENST00000515397 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
VCAN-212ENST00000515397 ALCAMQ13740 583 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 KMT5BQ4FZB7 885 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 ZNF280DQ6N043 979 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 USP37Q86T82 979 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 OR5B17Q8NGF7 314 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 CRISPLD1Q9H336 500 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 KCNK12Q9HB15 430 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 SLC27A5Q9Y2P5 690 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 DERAQ9Y315 318 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
VCAN-212ENST00000515397 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 NARSO43776 548 aaKnown RBP12.42□□□□□ -0.42
VCAN-212ENST00000515397 SOAT2O75908 522 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 OAZ2O95190 189 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 IL18RAPO95256 599 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
VCAN-212ENST00000515397 ITGB3P05106 788 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 KRT19P08727 400 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 DUSP4Q13115 394 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 OVOS1Q6IE37 1185 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 POTEHQ6S545 545 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 STXBP4Q6ZWJ1 553 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 TTC9BQ8N6N2 239 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 ATAD1Q8NBU5 361 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 PBXIP1Q96AQ6 731 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 RPP25Q9BUL9 199 aaKnown RBP12.42□□□□□ -0.42
VCAN-212ENST00000515397 MTMR12Q9C0I1 747 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
VCAN-212ENST00000515397 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 MAPK8IP1Q9UQF2 711 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 SCN1AP35498 2009 aa12.42□□□□□ -0.42
VCAN-212ENST00000515397 TCHHQ07283 1943 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
VCAN-212ENST00000515397 PVALEFA0A1B0GWK0 134 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 PRR33A8MZF0 331 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 EIF3DO15371 548 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCAN-212ENST00000515397 XYLBO75191 536 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 ZNF202O95125 648 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 C1RP00736 705 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 HNRNPA1P09651 372 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCAN-212ENST00000515397 ODC1P11926 461 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 LAMP2P13473 410 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 ATF2P15336 505 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 TAF6P49848 677 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 TWF1Q12792 350 aa12.41□□□□□ -0.42
VCAN-212ENST00000515397 BFSP1Q12934 665 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms