RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KLC3Q6P597 504 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 RRAGAQ7L523 313 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 EHBP1Q8NDI1 1231 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 REEP2Q9BRK0 252 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PPP1R12CQ9BZL4 782 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 EPN3Q9H201 632 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 MLXIPQ9HAP2 919 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CCDC177Q9NQR7 707 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 INTUQ9ULD6 942 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PPP1R9AQ9ULJ8 1098 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PLAAQ9Y263 795 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TRIM17Q9Y577 477 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 BRCA1P38398 1863 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 EML1O00423 815 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 MEIS1O00470 390 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 POLR2EP19388 210 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GBP1P32455 592 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBB4BP68371 445 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 BYSLQ13895 437 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 GNA13Q14344 377 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SPRED3Q2MJR0 410 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 HAUS3Q68CZ6 603 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PHLDB2Q86SQ0 1253 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 NELL1Q92832 810 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SH3KBP1Q96B97 665 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CSRNP1Q96S65 589 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SH3GL2Q99962 352 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 IFIH1Q9BYX4 1025 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 EDEM3Q9BZQ6 932 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 SCHIP1Q9P0W5 487 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CEP72Q9P209 647 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 HMGXB4Q9UGU5 601 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 PCDHB2Q9Y5E7 798 aa7.91□□□□□ -1.14
PDLIM5-219ENST00000514743 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ZW10O43264 779 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 CYP2C9P11712 490 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 USP14P54578 494 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 GFPT1Q06210 699 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 EDRF1Q3B7T1 1238 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 HERC4Q5GLZ8 1057 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ALS2CLQ60I27 953 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 SLC30A10Q6XR72 485 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ARHGEF18Q6ZSZ5 1173 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 CREG2Q8IUH2 290 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 CDAN1Q8IWY9 1227 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ACER1Q8TDN7 264 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ACAP3Q96P50 834 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 GANQ9H2C0 597 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TDRKHQ9Y2W6 561 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 SSU72P8A0A1W2PR75 194 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TRIM64A6NGJ6 449 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TRIM64BA6NI03 449 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 PRSS47A8MTI9 375 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 RSPH10B2B2RC85 870 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 MOCS3O95396 460 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 RSPH10BP0C881 870 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TSPAN7P41732 249 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 DNA2P51530 1060 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TBX4P57082 545 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 B2MP61769 119 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 DPYSQ14117 519 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ARL13BQ3SXY8 428 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 FOXB2Q5VYV0 432 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ZNF572Q7Z3I7 529 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD13CQ8N6S4 541 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 PPP1R14CQ8TAE6 165 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 CAGE1Q8TC20 777 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 IPCEF1Q8WWN9 437 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 RUSC1Q9BVN2 902 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 OSBPL7Q9BZF2 842 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 FHDC1Q9C0D6 1143 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 SMARCAL1Q9NZC9 954 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ZMYM2Q9UBW7 1377 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 TRAF3IP3Q9Y228 551 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 GIT1Q9Y2X7 761 aa7.9□□□□□ -1.14
PDLIM5-219ENST00000514743 ASTN1O14525 1302 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 CCDC162PA2VCL2 907 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 MAGEA13PA6NCF6 341 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 GOLGA8KD6RF30 607 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 MAGEB3O15480 346 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 RNASEH2AO75792 299 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 FOSP01100 380 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 ASLP04424 464 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 MYBP10242 640 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 ATP1A2P50993 1020 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 LAPTM5Q13571 262 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 BMT2Q1RMZ1 405 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 PDCD4Q53EL6 469 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM83BQ5T0W9 1011 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 DEPDC1Q5TB30 811 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 DSTYKQ6XUX3 929 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 VASH1Q7L8A9 365 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 NLRP14Q86W24 1093 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 SFR1Q86XK3 245 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms