RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 METTL23Q86XA0 190 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 NT5DC4Q86YG4 428 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 THEM5Q8N1Q8 247 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 TMEM105Q8N8V8 129 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 FEZF2Q8TBJ5 459 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
HTT-212ENST00000513639 SNX21Q969T3 373 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 BORCS6Q96GS4 357 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 CLIC6Q96NY7 704 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 NELL2Q99435 816 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 PANK2Q9BZ23 570 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 HAPLN2Q9GZV7 340 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 SMOC2Q9H3U7 446 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 CPSF3Q9UKF6 684 aaKnown RBP7.92□□□□□ -1.14
HTT-212ENST00000513639 AGO2Q9UKV8 859 aaKnown RBP7.92□□□□□ -1.14
HTT-212ENST00000513639 DSEQ9UL01 958 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 MTMR6Q9Y217 621 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 SIT1Q9Y3P8 196 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 C2CD2Q9Y426 696 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 ASB3Q9Y575 518 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 NUMBLQ9Y6R0 609 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 USP34Q70CQ2 3546 aa7.92□□□□□ -1.14
HTT-212ENST00000513639 WDR27A2RRH5 827 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 MYMKA6NI61 221 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 PROB1E7EW31 1015 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 PIRO00625 290 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 SPTLC2O15270 562 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 NCAM2O15394 837 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 NARSO43776 548 aaKnown RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 FAM189A1O60320 539 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ECI2O75521 394 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 FGF19O95750 216 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 HSP90AA1P07900 732 aaKnown RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 ODC1P11926 461 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 IDEP14735 1019 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 CPB1P15086 417 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 TNFSF9P41273 254 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 STAT6P42226 847 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ALDH1A3P47895 512 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 TUFMP49411 452 aaKnown RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 AARSP49588 968 aaKnown RBP eCLIP7.91□□□□□ -1.14
HTT-212ENST00000513639 ACOT2P49753 483 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 EPHB3P54753 998 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 GPC5P78333 572 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 NTHL1P78549 312 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 PRKCQQ04759 706 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 SPAG1Q07617 926 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 SMARCB1Q12824 385 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 MYBPC2Q14324 1141 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 STK38Q15208 465 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ZC2HC1CQ53FD0 456 aaPredicted RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 SLC44A4Q53GD3 710 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ATL3Q6DD88 541 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 OVOS1Q6IE37 1185 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 USP49Q70CQ1 688 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 PDZD4Q76G19 769 aaPredicted RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 CCDC65Q8IXS2 484 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 SYCP3Q8IZU3 236 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 IQUBQ8NA54 791 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 DTWD2Q8NBA8 298 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ITFG1Q8TB96 612 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 GPR152Q8TDT2 470 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 POMGNT1Q8WZA1 660 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 FGF14Q92915 247 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 E2F7Q96AV8 911 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ELSPBP1Q96BH3 223 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 MCRS1Q96EZ8 462 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 FIZ1Q96SL8 496 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 SEMA4AQ9H3S1 761 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 CUEDC2Q9H467 287 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 TMEM206Q9H813 350 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ZFP14Q9HCL3 533 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 ARHGEF3Q9NR81 526 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 OLFML3Q9NRN5 406 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 DPP3Q9NY33 737 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 HSFX1Q9UBD0 423 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 TUBGCP4Q9UGJ1 667 aa7.91□□□□□ -1.14
HTT-212ENST00000513639 R3HCC1Q9Y3T6 440 aaKnown RBP7.91□□□□□ -1.14
HTT-212ENST00000513639 ZNF292O60281 2723 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 SPTBN4Q9H254 2564 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 EP300Q09472 2414 aaPredicted RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 ANO9A1A5B4 782 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 KRBA1A5PL33 1030 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 ANKRD63C9JTQ0 380 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 CYB561D2O14569 222 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 KIAA0391O15091 583 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 PI15O43692 258 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 PPP6R2O75170 966 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 SEC24AO95486 1093 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 GARTP22102 1010 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 PNPLA4P41247 253 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 STARD6P59095 220 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 TWF1Q12792 350 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 C9orf57Q5W0N0 161 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 JADE1Q6IE81 842 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms