RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 SNX27Q96L92 541 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CLIC6Q96NY7 704 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 ACAP3Q96P50 834 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 RRAGDQ9NQL2 400 aaPredicted RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 SLC38A7Q9NVC3 462 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 CNTN3Q9P232 1028 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 IGSF9Q9P2J2 1179 aa10.74□□□□□ -0.69
CCL28-203ENST00000513525 LARSQ9P2J5 1176 aaKnown RBP10.74□□□□□ -0.69
CCL28-203ENST00000513525 USP34Q70CQ2 3546 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 MYO15AQ9UKN7 3530 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 GOLGA6L19H0YKK7 550 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 TRAPPC3O43617 180 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 B3GAT3O94766 335 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 POU2F2P09086 479 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCL28-203ENST00000513525 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
CCL28-203ENST00000513525 KCNE1P15382 129 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 SCP2P22307 547 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 AVPR2P30518 371 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 HOXA9P31269 272 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 GGCXP38435 758 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 UBA7P41226 1012 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 VCPP55072 806 aaKnown RBP10.73□□□□□ -0.69
CCL28-203ENST00000513525 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
CCL28-203ENST00000513525 RAD51AP2Q09MP3 1159 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 TDGQ13569 410 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 RAB33AQ14088 237 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCL28-203ENST00000513525 ARSHQ5FYA8 562 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.73□□□□□ -0.69
CCL28-203ENST00000513525 C3orf58Q8NDZ4 430 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 PLIN2Q99541 437 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
CCL28-203ENST00000513525 TCHPQ9BT92 498 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 KCNK12Q9HB15 430 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 EPS15L1Q9UBC2 864 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 MTRRQ9UBK8 725 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 DUSP12Q9UNI6 340 aa10.73□□□□□ -0.69
CCL28-203ENST00000513525 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 PDGFBP01127 241 aaPredicted RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 IGFBP6P24592 240 aaPredicted RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 ZNF131P52739 623 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 OSTNP61366 133 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 MCL1Q07820 350 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 C11orf57Q6ZUT1 292 aaPredicted RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 ANKS3Q6ZW76 656 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 LRRC15Q8TF66 581 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 NXPE3Q969Y0 559 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 ZBTB45Q96K62 511 aaPredicted RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 ZMAT2Q96NC0 199 aaKnown RBP10.72□□□□□ -0.69
CCL28-203ENST00000513525 MYADMQ96S97 322 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 BLOC1S4Q9NUP1 217 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCL28-203ENST00000513525 ZKSCAN5Q9Y2L8 839 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 BACE2Q9Y5Z0 518 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 PATJQ8NI35 1801 aa10.72□□□□□ -0.69
CCL28-203ENST00000513525 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 BECN2A8MW95 431 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 PODXLO00592 558 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 SYN3O14994 580 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 CLDN3O15551 220 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 MEFVO15553 781 aaPredicted RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 ADAM12O43184 909 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 C8AP07357 584 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 MYBP10242 640 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 TKTP29401 623 aaKnown RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 CDC25BP30305 580 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 RPL9P32969 192 aaKnown RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 OR1D2P34982 312 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 GRIN1Q05586 938 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 TCF15Q12870 199 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 GPBP1Q86WP2 473 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 REEP2Q9BRK0 252 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 CCSER1Q9C0I3 900 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 ANKFY1Q9P2R3 1169 aa10.71□□□□□ -0.69
CCL28-203ENST00000513525 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 ZFP37Q9Y6Q3 630 aaPredicted RBP10.71□□□□□ -0.69
CCL28-203ENST00000513525 DMDP11532 3685 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 ZNF638Q14966 1978 aaKnown RBP10.7□□□□□ -0.7
CCL28-203ENST00000513525 NPHP3-ACAD11A0A0J9YXS1 232 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 DPYSL4O14531 572 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 AP5Z1O43299 807 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 PIGRP01833 764 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 LAMP2P13473 410 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 PLCG1P19174 1290 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 ABCD1P33897 745 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 BRCC3P46736 316 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 CLCN5P51795 746 aa10.7□□□□□ -0.7
CCL28-203ENST00000513525 ZNF75DP51815 510 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms