RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 GPR88Q9GZN0 384 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 CRISPLD1Q9H336 500 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 KIF26AQ9ULI4 1882 aaPredicted RBP12.31□□□□□ -0.44
RNF4-218ENST00000513284 OTOL1A6NHN0 477 aaPredicted RBP12.31□□□□□ -0.44
RNF4-218ENST00000513284 ACKR2O00590 384 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 CDC45O75419 566 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 CAVIN2O95810 425 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
RNF4-218ENST00000513284 PRPF4BQ13523 1007 aaKnown RBP12.31□□□□□ -0.44
RNF4-218ENST00000513284 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 YAF2Q8IY57 180 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 UROC1Q96N76 676 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 ASAH2Q9NR71 780 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 AFF4Q9UHB7 1163 aaKnown RBP12.31□□□□□ -0.44
RNF4-218ENST00000513284 IGSF10Q6WRI0 2623 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 ABCA7Q8IZY2 2146 aa12.31□□□□□ -0.44
RNF4-218ENST00000513284 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 PATE3B3GLJ2 98 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 SYN3O14994 580 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
RNF4-218ENST00000513284 HYAL3O43820 417 aaPredicted RBP12.3□□□□□ -0.44
RNF4-218ENST00000513284 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
RNF4-218ENST00000513284 CREB5Q02930 508 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 DAB2IPQ5VWQ8 1189 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 CEP120Q8N960 986 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 LEMD2Q8NC56 503 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 GJB4Q9NTQ9 266 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 KLK13Q9UKR3 277 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 ADAMTS20P59510 1910 aa12.3□□□□□ -0.44
RNF4-218ENST00000513284 FLNBO75369 2602 aaKnown RBP12.3□□□□□ -0.44
RNF4-218ENST00000513284 H7C4K7 107 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 USO1O60763 962 aaKnown RBP12.29□□□□□ -0.44
RNF4-218ENST00000513284 IRX4P78413 519 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
RNF4-218ENST00000513284 CTXN3Q4LDR2 81 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 KIAA1211LQ6NV74 962 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 CAMKK1Q8N5S9 505 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 SLITRK6Q9H5Y7 841 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 POLD4Q9HCU8 107 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 SLC8A2Q9UPR5 921 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 INVSQ9Y283 1065 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 NEUROG3Q9Y4Z2 214 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 ASH1LQ9NR48 2969 aaKnown RBP12.29□□□□□ -0.44
RNF4-218ENST00000513284 CELSR3Q9NYQ7 3312 aa12.29□□□□□ -0.44
RNF4-218ENST00000513284 ASCC3Q8N3C0 2202 aaKnown RBP12.29□□□□□ -0.44
RNF4-218ENST00000513284 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 PODXLO00592 558 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 TRDMT1O14717 391 aaKnown RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 DTNBO60941 627 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 DEXIO95424 95 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 PRAMEF12O95522 483 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 EGFP01133 1207 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.44
RNF4-218ENST00000513284 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 MAPK6Q16659 721 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 NAIF1Q69YI7 327 aaPredicted RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 BLOC1S2Q6QNY1 142 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 DDX12PQ92771 950 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 C18orf25Q96B23 403 aaPredicted RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 JAKMIP1Q96N16 626 aaKnown RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 BBC3Q96PG8 261 aaPredicted RBP12.28□□□□□ -0.44
RNF4-218ENST00000513284 HHIPQ96QV1 700 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 FAM83CQ9BQN1 747 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
RNF4-218ENST00000513284 NUP205Q92621 2012 aa12.27□□□□□ -0.44
RNF4-218ENST00000513284 FAM221BA6H8Z2 402 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 WNT7AO00755 349 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 RNF40O75150 1001 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 RHOBTB1O94844 696 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 OR4Q2P0C623 313 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 LIG1P18858 919 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 PSMA5P28066 241 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 DUSP4Q13115 394 aa12.27□□□□□ -0.45
RNF4-218ENST00000513284 ITPRIPL2Q3MIP1 535 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms