RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 RIT2Q99578 217 aa13.66□□□□□ -0.22
SDHA-215ENST00000512962 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
SDHA-215ENST00000512962 INO80BQ9C086 356 aaPredicted RBP13.66□□□□□ -0.22
SDHA-215ENST00000512962 CHRDQ9H2X0 955 aa13.66□□□□□ -0.22
SDHA-215ENST00000512962 C2orf42Q9NWW7 574 aa13.66□□□□□ -0.22
SDHA-215ENST00000512962 ADAM28Q9UKQ2 775 aa13.66□□□□□ -0.22
SDHA-215ENST00000512962 GPC6Q9Y625 555 aaPredicted RBP13.66□□□□□ -0.22
SDHA-215ENST00000512962 TTLL8A6PVC2 850 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 TM4SF5O14894 197 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 ZBTB43O43298 467 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 MICAL2O94851 1124 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 TDP2O95551 362 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 C1RP00736 705 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 RETP07949 1114 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 AKAP5P24588 427 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 SFNP31947 248 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 GRM2Q14416 872 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 NECTIN1Q15223 517 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 CCDC6Q16204 474 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 CSRP2Q16527 193 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 PPM1LQ5SGD2 360 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 TANGO2Q6ICL3 276 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
SDHA-215ENST00000512962 SLC7A14Q8TBB6 771 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
SDHA-215ENST00000512962 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
SDHA-215ENST00000512962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.65□□□□□ -0.22
SDHA-215ENST00000512962 F5P12259 2224 aa13.65□□□□□ -0.22
SDHA-215ENST00000512962 C1QTNF9BB2RNN3 333 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 CHURC1-FNTBB4DL54 471 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 KIF4AO95239 1232 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 C1QTNF9P0C862 333 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 CEBPBP17676 345 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 FNTBP49356 437 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 DNM2P50570 870 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 CDC42EP1Q00587 391 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
SDHA-215ENST00000512962 PFKPQ01813 784 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 LAMTOR4Q0VGL1 99 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 SF3A2Q15428 464 aaKnown RBP13.64□□□□□ -0.23
SDHA-215ENST00000512962 ZNF852Q6ZMS4 543 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 TRIM46Q7Z4K8 759 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
SDHA-215ENST00000512962 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 DMGDHQ9UI17 866 aaKnown RBP13.64□□□□□ -0.23
SDHA-215ENST00000512962 IGF2RP11717 2491 aa13.64□□□□□ -0.23
SDHA-215ENST00000512962 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
SDHA-215ENST00000512962 AKAP13Q12802 2813 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 B4GALT5O43286 388 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 HNRNPA1P09651 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
SDHA-215ENST00000512962 MAPK8P45983 427 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 SHC2P98077 582 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 PSMD5Q16401 504 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 CELF5Q8N6W0 485 aaKnown RBP13.63□□□□□ -0.23
SDHA-215ENST00000512962 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
SDHA-215ENST00000512962 TIMMDC1Q9NPL8 285 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 IGSF5Q9NSI5 407 aa13.63□□□□□ -0.23
SDHA-215ENST00000512962 TRIP11Q15643 1979 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 LAMA1P25391 3075 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 CASTOR2A6NHX0 329 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 LRP3O75074 770 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 ECI2O75521 394 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 HOXA9P31269 272 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 SIM2Q14190 667 aaPredicted RBP13.62□□□□□ -0.23
SDHA-215ENST00000512962 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
SDHA-215ENST00000512962 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
SDHA-215ENST00000512962 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 GPR65Q8IYL9 337 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 RNF149Q8NC42 400 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 TCEAL4Q96EI5 215 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 NELL2Q99435 816 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 RBM12Q9NTZ6 932 aaKnown RBP13.62□□□□□ -0.23
SDHA-215ENST00000512962 RAB23Q9ULC3 237 aa13.62□□□□□ -0.23
SDHA-215ENST00000512962 FASNP49327 2511 aaKnown RBP13.61□□□□□ -0.23
SDHA-215ENST00000512962 A0A1B0GTH6 734 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 FIGNL2A6NMB9 653 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 K7ESF4 209 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 PROS1P07225 676 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 CPA1P15085 419 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 ARF4P18085 180 aaPredicted RBP13.61□□□□□ -0.23
SDHA-215ENST00000512962 MSX1P28360 303 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
SDHA-215ENST00000512962 ACAP1Q15027 740 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 FAM171A1Q5VUB5 890 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 SYNE3Q6ZMZ3 975 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 Q6ZS52 159 aa13.61□□□□□ -0.23
SDHA-215ENST00000512962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms