RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 NCANO14594 1321 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 K7ERI5 159 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 EXTL3O43909 919 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 RHOBTB1O94844 696 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 FGF19O95750 216 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 GRM5P41594 1212 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
DDX41-215ENST00000512431 ZNF252P-AS1Q0IIN9 211 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 ARHGAP15Q53QZ3 475 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 WDR44Q5JSH3 913 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 RSPRY1Q96DX4 576 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 ZFYVE19Q96K21 471 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
DDX41-215ENST00000512431 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 OBP2AQ9NY56 170 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 CYP46A1Q9Y6A2 500 aa13.76□□□□□ -0.21
DDX41-215ENST00000512431 F5P12259 2224 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 C4orf47A7E2U8 309 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 NEMFO60524 1076 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 CYP11B2P19099 503 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 HOXC13P31276 330 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 KRT2P35908 639 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 OSTNP61366 133 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX41-215ENST00000512431 ITPRIPL2Q3MIP1 535 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 XKR4Q5GH76 650 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 CAMKK1Q8N5S9 505 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 WASF1Q92558 559 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 DDX12PQ92771 950 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
DDX41-215ENST00000512431 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 TMEM209Q96SK2 561 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
DDX41-215ENST00000512431 ATXN3LQ9H3M9 355 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 TNFSF13BQ9Y275 285 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 YIPF1Q9Y548 306 aa13.75□□□□□ -0.21
DDX41-215ENST00000512431 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 CAVIN2O95810 425 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 EDN1P05305 212 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 AMPD2Q01433 879 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 CREB5Q02930 508 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
DDX41-215ENST00000512431 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
DDX41-215ENST00000512431 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 PLK5Q496M5 336 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
DDX41-215ENST00000512431 SH3PXD2AQ5TCZ1 1133 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 ALKAL1Q6UXT8 129 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 CATSPER3Q86XQ3 398 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 TCHPQ9BT92 498 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 KIFC3Q9BVG8 833 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 ASB3Q9Y575 518 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
DDX41-215ENST00000512431 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
DDX41-215ENST00000512431 GIPC1O14908 333 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 REC8O95072 547 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 CEACAM1P13688 526 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 KCNE1P15382 129 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 SPINK2P20155 84 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
DDX41-215ENST00000512431 DUSP4Q13115 394 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 NR5A1Q13285 461 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 GPR158Q5T848 1215 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 USP37Q86T82 979 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 TMC8Q8IU68 726 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 CEP120Q8N960 986 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 ERMNQ8TAM6 284 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 EXOC4Q96A65 974 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
DDX41-215ENST00000512431 PGLYRP2Q96PD5 576 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 LRRC3Q9BY71 257 aa13.73□□□□□ -0.21
DDX41-215ENST00000512431 DUSP15Q9H1R2 295 aaPredicted RBP13.73□□□□□ -0.21
DDX41-215ENST00000512431 FAM208BQ5VWN6 2430 aa13.72□□□□□ -0.21
DDX41-215ENST00000512431 PDCD11Q14690 1871 aaKnown RBP13.72□□□□□ -0.21
DDX41-215ENST00000512431 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
DDX41-215ENST00000512431 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
DDX41-215ENST00000512431 GABRR2P28476 465 aa13.72□□□□□ -0.21
DDX41-215ENST00000512431 MCM2P49736 904 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms