RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 USTQ9Y2C2 406 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 DERAQ9Y315 318 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 C2CD2Q9Y426 696 aa17.86■□□□□ 0.45
DDX41-213ENST00000512027 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 H7C4K7 107 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 PIRO00625 290 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 EXTL3O43909 919 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 PAPLNO95428 1278 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 SEC24AO95486 1093 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 PRR29P0C7W0 189 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 CDR1P51861 262 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 NDUFA8P51970 172 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 LILRA4P59901 499 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 HFE2Q6ZVN8 426 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 STXBP4Q6ZWJ1 553 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 OTOP3Q7RTS5 596 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 ZDHHC14Q8IZN3 488 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 APPL2Q8NEU8 664 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 ZNF507Q8TCN5 953 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 SCFD1Q8WVM8 642 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 ACSF2Q96CM8 615 aaPredicted RBP17.85■□□□□ 0.45
DDX41-213ENST00000512027 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 TSPAN18Q96SJ8 248 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 PDE11AQ9HCR9 933 aa17.85■□□□□ 0.45
DDX41-213ENST00000512027 PTPRJQ12913 1337 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 PRR33A8MZF0 331 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 CLIC2O15247 247 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 EIF3DO15371 548 aaKnown RBP eCLIP17.84■□□□□ 0.45
DDX41-213ENST00000512027 TGFB1I1O43294 461 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 ABLIM3O94929 683 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 IL18RAPO95256 599 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 HNRNPA1P09651 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
DDX41-213ENST00000512027 CPB1P15086 417 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 TFAMQ00059 246 aaKnown RBP17.84■□□□□ 0.45
DDX41-213ENST00000512027 YWHAHQ04917 246 aaPredicted RBP17.84■□□□□ 0.45
DDX41-213ENST00000512027 CYP26C1Q6V0L0 522 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 RNF19BQ6ZMZ0 732 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 TRIM67Q6ZTA4 783 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 CBWD2Q8IUF1 395 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 GPD1LQ8N335 351 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 ZNF461Q8TAF7 563 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 RSAD2Q8WXG1 361 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 TMEM209Q96SK2 561 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 RHOBTB2Q9BYZ6 727 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 CYP4F11Q9HBI6 524 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 HSPBP1Q9NZL4 362 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
DDX41-213ENST00000512027 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
DDX41-213ENST00000512027 SYKP43405 635 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 USP37Q86T82 979 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 C1orf127Q8N9H9 656 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 PGLYRP2Q96PD5 576 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 PYM1Q9BRP8 204 aaKnown RBP17.83■□□□□ 0.44
DDX41-213ENST00000512027 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
DDX41-213ENST00000512027 AGPAT3Q9NRZ7 376 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
DDX41-213ENST00000512027 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 TMEM221A6NGB7 291 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 M0R296 226 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 PRRG1O14668 218 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 XYLBO75191 536 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 VNN2O95498 520 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 ITGB3P05106 788 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 ODC1P11926 461 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 ATF2P15336 505 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 FSHRP23945 695 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 POLR2BP30876 1174 aaKnown RBP17.82■□□□□ 0.44
DDX41-213ENST00000512027 HOXA9P31269 272 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 ELF1P32519 619 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 TAF6P49848 677 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 CYP2J2P51589 502 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 POU5F1Q01860 360 aaKnown RBP17.82■□□□□ 0.44
DDX41-213ENST00000512027 ADCY1Q08828 1119 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 STK4Q13043 487 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 KMT5BQ4FZB7 885 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 OVOS1Q6IE37 1185 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 RDH13Q8NBN7 331 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 KIAA0895Q8NCT3 520 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 ITFG1Q8TB96 612 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 MTMR12Q9C0I1 747 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 DNMT3BQ9UBC3 853 aaKnown RBP17.82■□□□□ 0.44
DDX41-213ENST00000512027 INSL5Q9Y5Q6 135 aa17.82■□□□□ 0.44
DDX41-213ENST00000512027 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.82■□□□□ 0.44
DDX41-213ENST00000512027 UBE4BO95155 1302 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 FAM237AA0A1B0GTK4 181 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 OAZ2O95190 189 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 PDGFBP01127 241 aaPredicted RBP17.81■□□□□ 0.44
DDX41-213ENST00000512027 TYMPP19971 482 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 SIGLEC14Q08ET2 396 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 MTMR3Q13615 1198 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 UVSSAQ2YD98 709 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 OR5B17Q8NGF7 314 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 OR10T2Q8NGX3 314 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 ING5Q8WYH8 240 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 ASIC4Q96FT7 647 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 CRISPLD1Q9H336 500 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 KCNK12Q9HB15 430 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms