RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 PRPF4O43172 522 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEK1-206ENST00000510533 ADCY3O60266 1144 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 KLRC1P26715 233 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MRPS15P82914 257 aaKnown RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MED15Q96RN5 788 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 SLC40A1Q9NP59 571 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 C20orf96Q9NUD7 363 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 SNX9Q9Y5X1 595 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MAP3K4Q9Y6R4 1608 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 ASB14A6NK59 587 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 EIF3DO15371 548 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEK1-206ENST00000510533 TBC1D4O60343 1298 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 ELOA2Q8IYF1 753 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 KIAA2013Q8IYS2 634 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 ARHGEF1Q92888 912 aaKnown RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 TMEM143Q96AN5 459 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MANSC1Q9H8J5 431 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 LZTS1Q9Y250 596 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
NEK1-206ENST00000510533 DPYSL4O14531 572 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 NLRP11P59045 1033 aaKnown RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 IRX1P78414 480 aaPredicted RBP11.1□□□□□ -0.63
NEK1-206ENST00000510533 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MFN1Q8IWA4 741 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 ATPAF2Q8N5M1 289 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 APPL2Q8NEU8 664 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 NSMCE4AQ9NXX6 385 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 LRRC7Q96NW7 1537 aa11.1□□□□□ -0.63
NEK1-206ENST00000510533 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 ANTXR2P58335 489 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 CYGBQ8WWM9 190 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 KLF6Q99612 283 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 FAM118BQ9BPY3 351 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 GRID1Q9ULK0 1009 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 EFCAB14O75071 495 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 C2orf69Q8N8R5 385 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 SPATA18Q8TC71 538 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 USP33Q8TEY7 942 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 E2F7Q96AV8 911 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 TBC1D23Q9NUY8 699 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 FLT1P17948 1338 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 EEF2KO00418 725 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 P4HA2O15460 535 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ABCA8O94911 1581 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 HIST1H2AGP0C0S8 130 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 FDPSP14324 419 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 HIST1H2ADP20671 130 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 COILP38432 576 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 TMEM132DQ14C87 1099 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 SETD3Q86TU7 594 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 PRPF39Q86UA1 669 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 DCUN1D1Q96GG9 259 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 HIST1H2AHQ96KK5 128 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 HIST1H2AJQ99878 128 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 H2AFJQ9BTM1 129 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 TMEM8AQ9HCN3 771 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ABT1Q9ULW3 272 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 PPP1R3GB7ZBB8 358 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 KRT8P05787 483 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 GRIK1P39086 918 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 KCNJ1P48048 391 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 LAMB3Q13751 1172 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 SPDYAQ5MJ70 313 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 PPP4R4Q6NUP7 873 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 IFNEQ86WN2 208 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 ZNF512BQ96KM6 892 aaPredicted RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
NEK1-206ENST00000510533 ATP11BQ9Y2G3 1177 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms