RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 DAB2IPQ5VWQ8 1189 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 DNERQ8NFT8 737 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 DYDC1Q8WWB3 177 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 CNTN6Q9UQ52 1028 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 VGLL3A8MV65 326 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 GJC1P36383 396 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 RFC5P40937 340 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 VPS41P49754 854 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 TAS2R40P59535 323 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 NCOA4Q13772 614 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 ITIH4Q14624 930 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 KYNUQ16719 465 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 KCNV1Q6PIU1 500 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 PIGWQ7Z7B1 504 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 FEZF2Q8TBJ5 459 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 CCT6BQ92526 530 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 NIFKQ9BYG3 293 aaKnown RBP19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 TMEM134Q9H6X4 195 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 IP6K2Q9UHH9 426 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 NUB1Q9Y5A7 615 aa19.05■□□□□ 0.64
CCHCR1-228ENST00000509552 GHRP10912 638 aa19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 SSTR3P32745 418 aaPredicted RBP19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 IFNAR2P48551 515 aa19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 ZBTB41Q5SVQ8 909 aa19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 TAX1BP1Q86VP1 789 aa19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 NRBP2Q9NSY0 501 aa19.04■□□□□ 0.64
CCHCR1-228ENST00000509552 NFKBIEO00221 500 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 O00370 1275 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 DNM1LO00429 736 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 LMNB2Q03252 620 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 PRAMEF18Q5VWM3 479 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 SEPT14Q6ZU15 432 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 CEP128Q6ZU80 1094 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 GSTA5Q7RTV2 222 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 OR5B17Q8NGF7 314 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 ZNF526Q8TF50 670 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 DNAJC17Q9NVM6 304 aaKnown RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 CCT8L1PA6NM43 557 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 SPDYE16A6NNV3 312 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 HARSP12081 509 aaKnown RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 CD58P19256 250 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 AP3M2P53677 418 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 ANKRD35Q8N283 1001 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 JPH2Q9BR39 696 aaPredicted RBP19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 CCDC77Q9BR77 488 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 FZD1Q9UP38 647 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 NEU2Q9Y3R4 380 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 CNTNAP2Q9UHC6 1331 aa19.03■□□□□ 0.64
CCHCR1-228ENST00000509552 TCEA3O75764 348 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 SCTRP47872 440 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 MNAT1P51948 309 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 ZFYVE27Q5T4F4 411 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 IZUMO3Q5VZ72 239 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 CHST13Q8NET6 341 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 RBM41Q96IZ5 413 aaKnown RBP19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 ELAC2Q9BQ52 826 aaKnown RBP19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 NINJ2Q9NZG7 142 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 ADGRA2Q96PE1 1338 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 ATP2C2O75185 946 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 RCOR2Q8IZ40 523 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 CCHCR1Q8TD31 782 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 ZNF606Q8WXB4 792 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 FAM118BQ9BPY3 351 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 SLC40A1Q9NP59 571 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 KLC4Q9NSK0 619 aa19.02■□□□□ 0.64
CCHCR1-228ENST00000509552 TMEM120BA0PK00 339 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 ADCY3O60266 1144 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 RASSF9O75901 435 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 CALB1P05937 261 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 NFX1Q12986 1120 aaKnown RBP19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 ANGEL2Q5VTE6 544 aaKnown RBP19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 KCNK9Q9NPC2 374 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 IGKV6D-21A0A0A0MT36 114 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 MMP8P22894 467 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 CAPSQ13938 189 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 SPRED3Q2MJR0 410 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 SEZ6Q53EL9 994 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 ZPBP2Q6X784 338 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 MGARPQ8TDB4 240 aa19.01■□□□□ 0.63
CCHCR1-228ENST00000509552 GSTTP1A0A1W2PQM5 241 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 GTF2A1P52655 376 aaPredicted RBP19■□□□□ 0.63
CCHCR1-228ENST00000509552 CNTN2Q02246 1040 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 CHADLQ6NUI6 762 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 RELL1Q8IUW5 271 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 WDR49Q8IV35 697 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 BRSK2Q8IWQ3 736 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 KLRG1Q96E93 195 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 TCHPQ9BT92 498 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 TJP3O95049 919 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 GJB6O95452 261 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 LSM8O95777 96 aaKnown RBP19■□□□□ 0.63
CCHCR1-228ENST00000509552 EDN1P05305 212 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 ZNF132P52740 706 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 EFNA5P52803 228 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 GRM1Q13255 1194 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 STAT4Q14765 748 aa19■□□□□ 0.63
CCHCR1-228ENST00000509552 LRRC14Q15048 493 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms