RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
TPM3-219ENST00000509409 BCO2Q9BYV7 579 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 ZFP14Q9HCL3 533 aa16.71■□□□□ 0.27
TPM3-219ENST00000509409 OR6C75A6NL08 312 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 OAZ2O95190 189 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 OR4Q2P0C623 313 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 GLULP15104 373 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 CD72P21854 359 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
TPM3-219ENST00000509409 CUL4AQ13619 759 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 ZC2HC1CQ53FD0 456 aaPredicted RBP16.7■□□□□ 0.26
TPM3-219ENST00000509409 SPATA1Q5VX52 437 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 RRAGBQ5VZM2 374 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 OVOS1Q6IE37 1185 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 CEP72Q9P209 647 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 CPSF3Q9UKF6 684 aaKnown RBP16.7■□□□□ 0.26
TPM3-219ENST00000509409 MTF2Q9Y483 593 aaPredicted RBP16.7■□□□□ 0.26
TPM3-219ENST00000509409 R4GN57 208 aa16.7■□□□□ 0.26
TPM3-219ENST00000509409 PTPRZ1P23471 2315 aaPredicted RBP16.7■□□□□ 0.26
TPM3-219ENST00000509409 ANKRD63C9JTQ0 380 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 MICAL2O94851 1124 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 SP9P0CG40 484 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 TXLNAP40222 546 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 CCR2P41597 374 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 ALDH1A3P47895 512 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 ACOT2P49753 483 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 LILRA4P59901 499 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 DUSP4Q13115 394 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 PLD1Q13393 1074 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 GRM2Q14416 872 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 TMEM132DQ14C87 1099 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 FAM78AQ5JUQ0 283 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 POTEHQ6S545 545 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 TPRG1Q6ZUI0 275 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 MAP4K3Q8IVH8 894 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 SLITRK6Q9H5Y7 841 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 SPATA6Q9NWH7 488 aaPredicted RBP16.69■□□□□ 0.26
TPM3-219ENST00000509409 AGO2Q9UKV8 859 aaKnown RBP16.69■□□□□ 0.26
TPM3-219ENST00000509409 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
TPM3-219ENST00000509409 PPEF2O14830 753 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 NCAM2O15394 837 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 LAMTOR5O43504 91 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 FAM189A1O60320 539 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 ADRB2P07550 413 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 ODC1P11926 461 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 GJA1P17302 382 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 TYMPP19971 482 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 PAX3P23760 479 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
TPM3-219ENST00000509409 EPHB3P54753 998 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 ZC3H14Q6PJT7 736 aaKnown RBP16.68■□□□□ 0.26
TPM3-219ENST00000509409 ZNF852Q6ZMS4 543 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 SV2BQ7L1I2 683 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 POMGNT1Q8WZA1 660 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 ZSWIM3Q96MP5 696 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 FIZ1Q96SL8 496 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 NELL2Q99435 816 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 DDX23Q9BUQ8 820 aaKnown RBP16.68■□□□□ 0.26
TPM3-219ENST00000509409 TRMT61BQ9BVS5 477 aaKnown RBP16.68■□□□□ 0.26
TPM3-219ENST00000509409 OSBPL6Q9BZF3 934 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 SEMA4AQ9H3S1 761 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 LTB4R2Q9NPC1 389 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 HEBP1Q9NRV9 189 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 SLC27A5Q9Y2P5 690 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 MRPS17Q9Y2R5 130 aaKnown RBP16.68■□□□□ 0.26
TPM3-219ENST00000509409 DERAQ9Y315 318 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 YIPF1Q9Y548 306 aa16.68■□□□□ 0.26
TPM3-219ENST00000509409 SRPRBQ9Y5M8 271 aaKnown RBP16.68■□□□□ 0.26
TPM3-219ENST00000509409 DMDP11532 3685 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 TISP43B9A030 160 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
TPM3-219ENST00000509409 NFICP08651 508 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 GPR17Q13304 367 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 POSTNQ15063 836 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 PTPAQ15257 358 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 METTL23Q86XA0 190 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 SFR1Q86XK3 245 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 SMARCD2Q92925 531 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 ASB7Q9H672 318 aa16.67■□□□□ 0.26
TPM3-219ENST00000509409 MRPL44Q9H9J2 332 aaKnown RBP16.67■□□□□ 0.26
TPM3-219ENST00000509409 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms