RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DCNP07585 359 aaKnown RBP15.88■□□□□ 0.13
HMGCL-208ENST00000509389 PLS3P13797 630 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 ROR1Q01973 937 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 STRN3Q13033 797 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 STX1AQ16623 288 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 NPAS3Q8IXF0 933 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 TMEM161BQ8NDZ6 487 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 ZNF461Q8TAF7 563 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 PANK2Q9BZ23 570 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 DLGAP2Q9P1A6 1054 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 SIT1Q9Y3P8 196 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
HMGCL-208ENST00000509389 WDR27A2RRH5 827 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SYN3O14994 580 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 TBC1D4O60343 1298 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 TOM1L1O75674 476 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ABLIM3O94929 683 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 MAPTP10636 758 aaKnown RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SLC12A3P55017 1021 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 STARD6P59095 220 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SLC10A6Q3KNW5 377 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SEZ6Q53EL9 994 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 GRAMD1CQ8IYS0 662 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ING5Q8WYH8 240 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 RAD54LQ92698 747 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 GSDMAQ96QA5 445 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 FOXQ1Q9C009 403 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ANKFY1Q9P2R3 1169 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 KCNG1Q9UIX4 513 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 MRPS23Q9Y3D9 190 aaKnown RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 GVINP1Q7Z2Y8 2422 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 VPS13AQ96RL7 3174 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 CACNA1IQ9P0X4 2223 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 MIA3Q5JRA6 1907 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 COL4A3Q01955 1670 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ARHGEF37A1IGU5 675 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 RHOP08100 348 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ELF1P32519 619 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SMTNP53814 917 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ARPP19P56211 112 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 NLRP12P59046 1061 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 MORC3Q14149 939 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 MRPL58Q14197 206 aaKnown RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SLC5A9Q2M3M2 681 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SASS6Q6UVJ0 657 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ZPBP2Q6X784 338 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ERCC4Q92889 916 aaPredicted RBP15.87■□□□□ 0.13
HMGCL-208ENST00000509389 SHDQ96IW2 340 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 C7orf25Q9BPX7 421 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 KXD1Q9BQD3 176 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 RBSNQ9H1K0 784 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 ANO10Q9NW15 660 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 FBXL5Q9UKA1 691 aa15.87■□□□□ 0.13
HMGCL-208ENST00000509389 GOLGA6L3A6NEY3 463 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 H7C4K7 107 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 PRRG1O14668 218 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 KLRC4O43908 158 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 SEC24AO95486 1093 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 LRG1P02750 347 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 GLULP15104 373 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 ATF2P15336 505 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 PTPN2P17706 415 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 BMP6P22004 513 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-208ENST00000509389 MCL1Q07820 350 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 KCNB1Q14721 858 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 ARSHQ5FYA8 562 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 POTEHQ6S545 545 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 TCEAL8Q8IYN2 117 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 PJA1Q8NG27 643 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 MCRS1Q96EZ8 462 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 CDK5RAP3Q96JB5 506 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 SUSD3Q96L08 255 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 BPIFA3Q9BQP9 254 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 TRIM9Q9C026 710 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 HAPLN2Q9GZV7 340 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 AVENQ9NQS1 362 aaPredicted RBP15.86■□□□□ 0.13
HMGCL-208ENST00000509389 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 MAN1B1Q9UKM7 699 aa15.86■□□□□ 0.13
HMGCL-208ENST00000509389 CLDN3O15551 220 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 LRRN2O75325 713 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 SMC2O95347 1197 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 EHHADHQ08426 723 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 CUL4BQ13620 913 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 MLF2Q15773 248 aaPredicted RBP15.85■□□□□ 0.13
HMGCL-208ENST00000509389 DPCR1Q3MIW9 517 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 CTXN3Q4LDR2 81 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 SLC44A4Q53GD3 710 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 ADSSL1Q8N142 457 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 TMEM130Q8N3G9 435 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 FAM200AQ8TCP9 573 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 DDX12PQ92771 950 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
HMGCL-208ENST00000509389 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms