RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 TSPAN1O60635 241 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 EIF5BO60841 1220 aaKnown RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 RGS9O75916 674 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 LYPLA2O95372 231 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 EDN1P05305 212 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 OR52Z1P0C646 297 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 SFPQP23246 707 aaKnown RBP eCLIP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 GJB2P29033 226 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 CDC25AP30304 524 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 HOXA11P31270 313 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 NRIP1P48552 1158 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 DNM2P50570 870 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 LMNB2Q03252 620 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 SRSF11Q05519 484 aaKnown RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 LEXMQ3ZCV2 418 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 PLPP4Q5VZY2 271 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 KCNT2Q6UVM3 1135 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 THNSL1Q8IYQ7 743 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 TBC1D32Q96NH3 1257 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 EIF2AQ9BY44 585 aaKnown RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 FOXP1Q9H334 677 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 RAPGEFL1Q9UHV5 662 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 CDH22Q9UJ99 828 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 BARX2Q9UMQ3 279 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-208ENST00000508492 HES2Q9Y543 173 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 BDP1A6H8Y1 2624 aa8.61□□□□□ -1.03
SH3D19-208ENST00000508492 TCHHQ07283 1943 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 HIDE1A8MVS5 230 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 FSCN2O14926 492 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 DKC1O60832 514 aaKnown RBP eCLIP8.6□□□□□ -1.03
SH3D19-208ENST00000508492 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
SH3D19-208ENST00000508492 ARL2P36404 184 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 BCAR1P56945 870 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 MBTD1Q05BQ5 628 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 AAK1Q2M2I8 961 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 MCTP1Q6DN14 999 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 ZNF280BQ86YH2 543 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 ABI1Q8IZP0 508 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 SLC39A11Q8N1S5 342 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 LRRC43Q8N309 656 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 SMG8Q8ND04 991 aaKnown RBP8.6□□□□□ -1.03
SH3D19-208ENST00000508492 AUTS2Q8WXX7 1259 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 SEC16BQ96JE7 1060 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 KIFC3Q9BVG8 833 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 APOL6Q9BWW8 343 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 VN1R3Q9BXE9 311 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 LACRTQ9GZZ8 138 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 CXCL16Q9H2A7 254 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 EPHX3Q9H6B9 360 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 NRDE2Q9H7Z3 1164 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 ANKEF1Q9NU02 776 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 TBC1D13Q9NVG8 400 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 CLEC1BQ9P126 229 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 CACNG4Q9UBN1 327 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 PCDHB2Q9Y5E7 798 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 DOCK8Q8NF50 2099 aa8.6□□□□□ -1.03
SH3D19-208ENST00000508492 F8W810 466 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 INO80B-WBP1J3KQ70 363 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 ZC3H11AO75152 810 aaKnown RBP eCLIP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 OFD1O75665 1012 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 DDHD2O94830 711 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 EPXP11678 715 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 LAG3P18627 525 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 ATF4P18848 351 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 NME2P22392 152 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 SLC11A1P49279 550 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 PTENP60484 403 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 ADAM15Q13444 863 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 CAMK2GQ13555 558 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 LRRC14Q15048 493 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 SNAP47Q5SQN1 464 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 LLGL2Q6P1M3 1020 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 KCNK18Q7Z418 384 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 TCP11Q8WWU5 503 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 MRPS27Q92552 414 aaKnown RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 MSLNLQ96KJ4 702 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 CCDC43Q96MW1 224 aaKnown RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 TCF25Q9BQ70 676 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 APOL5Q9BWW9 433 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 NT5C1AQ9BXI3 368 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 INO80BQ9C086 356 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 NXF3Q9H4D5 531 aaKnown RBP8.59□□□□□ -1.03
SH3D19-208ENST00000508492 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 TLR9Q9NR96 1032 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 CHST12Q9NRB3 414 aa8.59□□□□□ -1.03
SH3D19-208ENST00000508492 MIOSQ9NXC5 875 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms