RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 NLRP4Q96MN2 994 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 SH2D3AQ9BRG2 576 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 COLEC11Q9BWP8 271 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 EIF2AQ9BY44 585 aaKnown RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 NIFKQ9BYG3 293 aaKnown RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 DISC1Q9NRI5 854 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 VPS45Q9NRW7 570 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 SUCLA2Q9P2R7 463 aaPredicted RBP7.81□□□□□ -1.16
VCAN-206ENST00000505615 NEUROG3Q9Y4Z2 214 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 HES2Q9Y543 173 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 IPPQ9Y573 584 aa7.81□□□□□ -1.16
VCAN-206ENST00000505615 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 SH2B2O14492 632 aaPredicted RBP7.8□□□□□ -1.16
VCAN-206ENST00000505615 HYAL3O43820 417 aaPredicted RBP7.8□□□□□ -1.16
VCAN-206ENST00000505615 EDIL3O43854 480 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 CSRP1P21291 193 aaKnown RBP7.8□□□□□ -1.16
VCAN-206ENST00000505615 CCNE1P24864 410 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 GDI1P31150 447 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 NAPAP54920 295 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 PTH1RQ03431 593 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 KIAA1211LQ6NV74 962 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 TXNDC11Q6PKC3 985 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 RALYLQ86SE5 291 aaKnown RBP7.8□□□□□ -1.16
VCAN-206ENST00000505615 PROSER1Q86XN7 944 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 PLEKHM2Q8IWE5 1019 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 TCEAL4Q96EI5 215 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 ASB16Q96NS5 453 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 PAAF1Q9BRP4 392 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 TTPALQ9BTX7 342 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 TRMT61BQ9BVS5 477 aaKnown RBP7.8□□□□□ -1.16
VCAN-206ENST00000505615 LNPKQ9C0E8 428 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 ZFP14Q9HCL3 533 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 UBN1Q9NPG3 1134 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 CACNA2D2Q9NY47 1150 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 KLK13Q9UKR3 277 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 MSRB2Q9Y3D2 182 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 SAMM50Q9Y512 469 aa7.8□□□□□ -1.16
VCAN-206ENST00000505615 SF3B1O75533 1304 aaKnown RBP eCLIP7.79□□□□□ -1.16
VCAN-206ENST00000505615 KNTC1P50748 2209 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 LNP1A1A4G5 178 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 HIP1O00291 1037 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 EXTL3O43909 919 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 RPP40O75818 363 aaKnown RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 THBS1P07996 1170 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 CEACAM1P13688 526 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 PSMC3P17980 439 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 MX2P20592 715 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 CIITAP33076 1130 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 CCR2P41597 374 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 SOX9P48436 509 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 PXNP49023 591 aaPredicted RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 DNM2P50570 870 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 MLLT6P55198 1093 aaPredicted RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 POU4F2Q12837 409 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 CLN3Q13286 438 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 RAB33AQ14088 237 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 LRRC32Q14392 662 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 COL28A1Q2UY09 1125 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 UVSSAQ2YD98 709 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 PLK5Q496M5 336 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 XKR3Q5GH77 459 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 JAKMIP3Q5VZ66 844 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 PKN3Q6P5Z2 889 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 C19orf48Q6RUI8 117 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 SRGAP1Q7Z6B7 1085 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 HASPINQ8TF76 798 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 ZC3H10Q96K80 434 aaKnown RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 MTA3Q9BTC8 594 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 UNC45AQ9H3U1 944 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 NXF3Q9H4D5 531 aaKnown RBP7.79□□□□□ -1.16
VCAN-206ENST00000505615 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 TCEAL9Q9UHQ7 104 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 COL4A3BPQ9Y5P4 624 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 ZMYM2Q9UBW7 1377 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 PTPRBP23467 1997 aa7.79□□□□□ -1.16
VCAN-206ENST00000505615 ADAMTS9Q9P2N4 1935 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 CCDC163A0A0D9SF12 145 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 ARHGEF37A1IGU5 675 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 SMCO2A6NFE2 343 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 MEN1O00255 615 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 CDX4O14627 284 aaPredicted RBP7.78□□□□□ -1.16
VCAN-206ENST00000505615 CHMP2AO43633 222 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 TSPAN1O60635 241 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 MOSPD3O75425 235 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 AKAP3O75969 853 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 KIF4AO95239 1232 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 VIPR2P41587 438 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 JAK3P52333 1124 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 GRIK3Q13003 919 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 CCINQ13939 588 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
VCAN-206ENST00000505615 PRR16Q569H4 304 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 FAM171A1Q5VUB5 890 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 DAB2IPQ5VWQ8 1189 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 B3GNT9Q6UX72 402 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 RTL10Q7L3V2 364 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms