RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FZD9O00144 591 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 ADRB2P07550 413 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 OR1G1P47890 313 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 IRX4P78413 519 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 GDAP1Q8TB36 358 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 GMLQ99445 158 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 VTA1Q9NP79 307 aa14.9□□□□□ -0.02
TCOF1-207ENST00000504761 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 NID2Q14112 1375 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 CD4P01730 458 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 ARSEP51690 589 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 RNF180Q86T96 592 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 TTC13Q8NBP0 860 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 CCHCR1Q8TD31 782 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 MORC4Q8TE76 937 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 ZC3H15Q8WU90 426 aaKnown RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 GTPBP10A4D1E9 387 aaKnown RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 TADA2AO75478 443 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 SEPT6Q14141 434 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 GOLGA7BQ2TAP0 167 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 CACNA2D3Q8IZS8 1091 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 RYBPQ8N488 228 aaPredicted RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 KCTD10Q9H3F6 313 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 METTL5Q9NRN9 209 aaKnown RBP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 DDX3XO00571 662 aaKnown RBP eCLIP14.89□□□□□ -0.039e-17■■□□□ 11.8
TCOF1-207ENST00000504761 GRIK1P39086 918 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 MYBPC2Q14324 1141 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 ANKRD20A3Q5VUR7 823 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 USP38Q8NB14 1042 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.033e-8■□□□□ 10.1
TCOF1-207ENST00000504761 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.89□□□□□ -0.03
TCOF1-207ENST00000504761 AIPL1Q9NZN9 384 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
TCOF1-207ENST00000504761 SRGAP2BP0DMP2 458 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 MAPTP10636 758 aaKnown RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 SLC1A1P43005 524 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 CDK17Q00537 523 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 GKAP1Q5VSY0 366 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 IZUMO3Q5VZ72 239 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 EMC1Q8N766 993 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 FEZF2Q8TBJ5 459 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 ZBTB10Q96DT7 871 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 SCYL1Q96KG9 808 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 HES2Q9Y543 173 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 ACKR2O00590 384 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 AP1B1Q10567 949 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 CXCL17Q6UXB2 119 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 PNKPQ96T60 521 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 PGK1P00558 417 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 CA4P22748 312 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 PMS2P54278 862 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 WDR59Q6PJI9 974 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 CCNI2Q6ZMN8 369 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 GPR142Q7Z601 462 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 UBQLN1Q9UMX0 589 aaKnown RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 TIMM13Q9Y5L4 95 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 SNCAIPQ9Y6H5 919 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 ATRNL1Q5VV63 1379 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 CRCPO75575 148 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 RALAP11233 206 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 TAF6P49848 677 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 ATG4AQ8WYN0 398 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 KLC2Q9H0B6 622 aa14.88□□□□□ -0.03
TCOF1-207ENST00000504761 DMGDHQ9UI17 866 aaKnown RBP14.88□□□□□ -0.03
TCOF1-207ENST00000504761 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 MT-ND3P03897 115 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 EIF3EP60228 445 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 GTF2BQ00403 316 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 EFHC2Q5JST6 749 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 BTBD8Q5XKL5 378 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 RAPH1Q70E73 1250 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 ZBED8Q8IZ13 594 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 CCDC38Q502W7 563 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 SRRM1Q8IYB3 904 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 OR2W6PQ8NHA6 318 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 LRRC8CQ8TDW0 803 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 PKNOX2Q96KN3 472 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 C9orf72Q96LT7 481 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 WDR35Q9P2L0 1181 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 ZNF214Q9UL59 606 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 CST8O60676 142 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 ARL4CP56559 192 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 CAPSQ13938 189 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 HYIQ5T013 277 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 HEATR6Q6AI08 1181 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 CEP120Q8N960 986 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 ATL2Q8NHH9 583 aa14.87□□□□□ -0.03
TCOF1-207ENST00000504761 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 THOC1Q96FV9 657 aaKnown RBP14.87□□□□□ -0.03
TCOF1-207ENST00000504761 GHRP10912 638 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms