RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HAUS4Q9H6D7 363 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 GOLGA2P5Q9HBQ8 144 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 TTC3P53804 2025 aa11.17□□□□□ -0.62
TPM3-217ENST00000504663 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
TPM3-217ENST00000504663 A0A087X0T9 212 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 SPTLC1O15269 473 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 FAM228BP0C875 321 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 LRPAP1P30533 357 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 RAB27AP51159 221 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 CLLU1OSQ5K130 101 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 CD300LGQ6UXG3 332 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 ENOSF1Q7L5Y1 443 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
TPM3-217ENST00000504663 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 TAF4BQ92750 862 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 JAKMIP2Q96AA8 810 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 SCLYQ96I15 445 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 GAD1Q99259 594 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 SMYD3Q9H7B4 428 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 PARP2Q9UGN5 583 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 HMGXB4Q9UGU5 601 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 UBQLN1Q9UMX0 589 aaKnown RBP11.16□□□□□ -0.62
TPM3-217ENST00000504663 GIT1Q9Y2X7 761 aa11.16□□□□□ -0.62
TPM3-217ENST00000504663 ATP8B3O60423 1300 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 CYP26A1O43174 497 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 ITGA4P13612 1032 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 TBXAS1P24557 533 aaPredicted RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 ATICP31939 592 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 RAP1GAPP47736 663 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 SCNN1GP51170 649 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 MFAP3P55082 362 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 FMO1Q01740 532 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 ARID5AQ03989 594 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 GFPT1Q06210 699 aaPredicted RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 KLHL30Q0D2K2 578 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 SLC18A3Q16572 532 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 SGSM1Q2NKQ1 1148 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 ZNF662Q6ZS27 426 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 SLC47A2Q86VL8 602 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 LRRC52Q8N7C0 313 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 C3orf58Q8NDZ4 430 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 TRIM43Q96BQ3 446 aaPredicted RBP11.15□□□□□ -0.62
TPM3-217ENST00000504663 TWNKQ96RR1 684 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 PCDHB18PQ96TA0 734 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 AGAP1Q9UPQ3 857 aa11.15□□□□□ -0.62
TPM3-217ENST00000504663 KIAA1671Q9BY89 1806 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 PJA2O43164 708 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 PHACTR2O75167 634 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 OFD1O75665 1012 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CFHP08603 1231 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CLTBP09497 229 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 ZSCAN20P17040 1043 aaPredicted RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 ANXA13P27216 316 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CYP2C18P33260 490 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CCL23P55773 120 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 RBP5P82980 135 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CYP27A1Q02318 531 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 INCA1Q0VD86 236 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 TRPC3Q13507 836 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 TDRD12Q587J7 1177 aaKnown RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 WDR44Q5JSH3 913 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 SCARA5Q6ZMJ2 495 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 DNAAF5Q86Y56 855 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 RBBP8NLQ8NC74 664 aaPredicted RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 BEST2Q8NFU1 509 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 FAM81BQ96LP2 452 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 PACSIN1Q9BY11 444 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 LACRTQ9GZZ8 138 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 RSAD1Q9HA92 442 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 CISHQ9NSE2 258 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 ZNHIT6Q9NWK9 470 aaKnown RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 TRMT1Q9NXH9 659 aaKnown RBP11.14□□□□□ -0.63
TPM3-217ENST00000504663 TRIM10Q9UDY6 481 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 ATP11BQ9Y2G3 1177 aa11.14□□□□□ -0.63
TPM3-217ENST00000504663 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 ENPP3O14638 875 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CILPO75339 1184 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 KRT19P08727 400 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 WEE2P0C1S8 567 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CCDC175P0C221 793 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 FGFR1P11362 822 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms