RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 KBTBD6Q86V97 674 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 RALGPS2Q86X27 583 aaPredicted RBP12.78□□□□□ -0.36
CDK9-205ENST00000498339 CEP120Q8N960 986 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 GTSE1Q9NYZ3 720 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
CDK9-205ENST00000498339 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 NUP205Q92621 2012 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 SPEGQ15772 3267 aa12.77□□□□□ -0.36
CDK9-205ENST00000498339 ANK1P16157 1881 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 MARCKSP29966 332 aaPredicted RBP12.77□□□□□ -0.37
CDK9-205ENST00000498339 MPLP40238 635 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 GRM5P41594 1212 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
CDK9-205ENST00000498339 EFNA5P52803 228 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 FOSBP53539 338 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 EPHB3P54753 998 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 MLLT6P55198 1093 aaPredicted RBP12.77□□□□□ -0.37
CDK9-205ENST00000498339 PLD1Q13393 1074 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 STXBP5Q5T5C0 1151 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.37
CDK9-205ENST00000498339 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 WASF1Q92558 559 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 RSPRY1Q96DX4 576 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 LOXL4Q96JB6 756 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 NACC1Q96RE7 527 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 EDEM2Q9BV94 578 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 ORC3Q9UBD5 711 aaPredicted RBP12.77□□□□□ -0.37
CDK9-205ENST00000498339 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
CDK9-205ENST00000498339 K7ERI5 159 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 EXTL3O43909 919 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 MED24O75448 989 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 SPATA31C1P0DKV0 1188 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 ALDH1A3P47895 512 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 EPHA5P54756 1037 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 ZNF252P-AS1Q0IIN9 211 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 ACAP1Q15027 740 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 SYNPOQ8N3V7 929 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 DDX12PQ92771 950 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 C18orf25Q96B23 403 aaPredicted RBP12.76□□□□□ -0.37
CDK9-205ENST00000498339 SUSD3Q96L08 255 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 LSM14BQ9BX40 385 aaKnown RBP12.76□□□□□ -0.37
CDK9-205ENST00000498339 CDT1Q9H211 546 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
CDK9-205ENST00000498339 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 TM4SF5O14894 197 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 OR4Q2P0C623 313 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 CYP11B2P19099 503 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 HOXA6P31267 233 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 YWHAHQ04917 246 aaPredicted RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 TCHHQ07283 1943 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 TNK2Q07912 1038 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 CCINQ13939 588 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 GPR158Q5T848 1215 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 PHLPP2Q6ZVD8 1323 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 GCNAQ96QF7 691 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 TCHPQ9BT92 498 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 MRPL4Q9BYD3 311 aaKnown RBP12.75□□□□□ -0.37
CDK9-205ENST00000498339 ATXN3LQ9H3M9 355 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 MAFFQ9ULX9 164 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 TNFSF13BQ9Y275 285 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 PCDHGA5Q9Y5G8 931 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 MYO16Q9Y6X6 1858 aa12.75□□□□□ -0.37
CDK9-205ENST00000498339 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 WNT7AO00755 349 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 MCM7P33993 719 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 RAP1GAPP47736 663 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 CREB5Q02930 508 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 TRIM29Q14134 588 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 PTPAQ15257 358 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 ELF2Q15723 593 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 ITPRIPL2Q3MIP1 535 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 PKN3Q6P5Z2 889 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
CDK9-205ENST00000498339 USP37Q86T82 979 aa12.74□□□□□ -0.37
CDK9-205ENST00000498339 TMC8Q8IU68 726 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms