RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MINPP1Q9UNW1 487 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SGPL1O95470 568 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SERPINB6P35237 376 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 PRR16Q569H4 304 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SHKBP1Q8TBC3 707 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 USP6NLQ92738 828 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 OSBPL8Q9BZF1 889 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SHCBP1LQ9BZQ2 653 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 TLE6Q9H808 572 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 ANAPC7Q9UJX3 599 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 FRMD4BQ9Y2L6 1034 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 CYP26A1O43174 497 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 EDIL3O43854 480 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 HPCAP84074 193 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 ASPHQ12797 758 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 IKQ13123 557 aaPredicted RBP13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 RASA2Q15283 850 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 CEP95Q96GE4 821 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 SIKE1Q9BRV8 207 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 MANSC1Q9H8J5 431 aa13.8□□□□□ -0.2
GAPVD1-220ENST00000497580 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 BOLA2-SMG1P6H3BVE0 249 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 KCNQ2O43526 872 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ZNF862O60290 1169 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ACAP1Q15027 740 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 TRIM67Q6ZTA4 783 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 RILPQ96NA2 401 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 HAPLN3Q96S86 360 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 LRRC19Q9H756 370 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 COL1A1P02452 1464 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 HNRNPCL1O60812 293 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 DNAJC6O75061 913 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 SLURP2P0DP57 97 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 BCRP11274 1271 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ARL4CP56559 192 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 DLG1Q12959 904 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 TRIP10Q15642 601 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ZNF34Q8IZ26 560 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 RBM15BQ8NDT2 890 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 GSTCDQ8NEC7 633 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 OR6Y1Q8NGX8 325 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 GRK7Q8WTQ7 553 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 HSFX1Q9UBD0 423 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PAIP2BQ9ULR5 123 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 NEU2Q9Y3R4 380 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 MYOCOSA0A1B0GUC4 107 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 RALAP11233 206 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ETS1P14921 441 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 BGNP21810 368 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 GCLMP48507 274 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ALDH18A1P54886 795 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 AQP4P55087 323 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 SFSWAPQ12872 951 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 CYP1B1Q16678 543 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PANX3Q96QZ0 392 aa13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
GAPVD1-220ENST00000497580 PDLIM1O00151 329 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 MAGEB2O15479 319 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 CHMP2AO43633 222 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 IVDP26440 423 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 MAPK4P31152 587 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 PLCB3Q01970 1234 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 NCOA4Q13772 614 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 CATSPER3Q86XQ3 398 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 DKC1O60832 514 aaKnown RBP eCLIP13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 TRPA1O75762 1119 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 MUTP22033 750 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 MTA1Q13330 715 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 HSPBAP1Q96EW2 488 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 ZNF148Q9UQR1 794 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 ACTL7BQ9Y614 415 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 LDHBP07195 334 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC12A3P55017 1021 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 SIK1P57059 783 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms