RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TMEM247A6NEH6 219 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 A8MVJ9 347 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 FADS2P1A8MWK0 482 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PI4K2BG5E9Z4 385 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PMM2O15305 246 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 NVLO15381 856 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 HOXC11O43248 304 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 USO1O60763 962 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 TSC22D2O75157 780 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 NPPAP01160 153 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 HPXP02790 462 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 GLI1P08151 1106 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 TOP1P11387 765 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CAPN3P20807 821 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 HNF1BP35680 557 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 SOX5P35711 763 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CHKAP35790 457 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 ECI1P42126 302 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 ATP5OP48047 213 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 MRPS15P82914 257 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 MVKQ03426 396 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CACNB2Q08289 660 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CETN1Q12798 172 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PRKG2Q13237 762 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 DYNC1I2Q13409 638 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC10A6Q3KNW5 377 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 BEND6Q5SZJ8 279 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 IKBIPQ70UQ0 350 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 LUZP1Q86V48 1076 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 SPATA24Q86W54 205 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 NIM1KQ8IY84 436 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 COLGALT2Q8IYK4 626 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 LRRC47Q8N1G4 583 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CRACR2BQ8N4Y2 399 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 LSMEM1Q8N8F7 131 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 IPMKQ8NFU5 416 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 DYDC1Q8WWB3 177 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 DHX58Q96C10 678 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 SNF8Q96H20 258 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 MAELQ96JY0 434 aaKnown RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CGREF1Q99674 301 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 JPH2Q9BR39 696 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 APOL5Q9BWW9 433 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 C8orf33Q9H7E9 229 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 HPS4Q9NQG7 708 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PRDM11Q9NQV5 511 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 LRP2BPQ9P2M1 347 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 HECAQ9UBI9 543 aaPredicted RBP3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF148Q9UQR1 794 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PLAAQ9Y263 795 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF281Q9Y2X9 895 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 PTCH2Q9Y6C5 1203 aa3.34□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC171Q6TFL3 1326 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TRAV6A0A075B6T7 132 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 IQANK1A0A1B0GTG1 560 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 CLRN2A0PK11 232 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 C2orf71A6NGG8 1288 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 E9PMD0 336 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ETV2O00321 342 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SULT1B1O43704 296 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 DAB1O75553 588 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 KRT14P02533 472 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 C6orf222P0C671 652 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 C1QTNF9P0C862 333 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ALAS1P13196 640 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ITGA4P13612 1032 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 HOXC12P31275 282 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 CCNFP41002 786 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 CCT5P48643 541 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 PPP2R2AP63151 447 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 RNF4P78317 190 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF200P98182 395 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 MESP2Q0VG99 397 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TRAP1Q12931 704 aaKnown RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TBX2Q13207 712 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SMAD4Q13485 552 aaKnown RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ITGA7Q13683 1181 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 GNA13Q14344 377 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SSPNQ14714 243 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC153Q494R4 210 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 CCDC38Q502W7 563 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TMEM67Q5HYA8 995 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 GPATCH4Q5T3I0 446 aaKnown RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 WLSQ5T9L3 541 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 LDHAL6AQ6ZMR3 332 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TOGARAM2Q6ZUX3 1019 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF227Q86WZ6 799 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SCYL3Q8IZE3 742 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 MAB21L3Q8N8X9 362 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 PDZD8Q8NEN9 1154 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 OTUD7AQ8TE49 926 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ARL8AQ96BM9 186 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SPDL1Q96EA4 605 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 MFSD3Q96ES6 412 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 VPS50Q96JG6 964 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 DESI2Q9BSY9 194 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 SPZ1Q9BXG8 430 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms