RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 NBPF20Q3BBV1 942 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
COL15A1-204ENST00000496686 MCOLN2Q8IZK6 566 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
COL15A1-204ENST00000496686 RUBCNQ92622 972 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 RPS6KC1Q96S38 1066 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 PDCL3Q9H2J4 239 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 CNTN3Q9P232 1028 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 PCDHGC3Q9UN70 934 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 COG5Q9UP83 839 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 RALGAPA2Q2PPJ7 1873 aa16.26■□□□□ 0.19
COL15A1-204ENST00000496686 TARSL2A2RTX5 802 aaKnown RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 THAP12O43422 761 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 CABYRO75952 493 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 PGK1P00558 417 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 KRT19P08727 400 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 MCM3P25205 808 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 NOMO3P69849 1222 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 BRD3Q15059 726 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 CLUL1Q15846 466 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 LIN9Q5TKA1 542 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 CCDC70Q6NSX1 233 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 FBXO38Q6PIJ6 1188 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 CXCL17Q6UXB2 119 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 PXYLP1Q8TE99 480 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 KIF12Q96FN5 646 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 ZNF518BQ9C0D4 1074 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 RAB21Q9UL25 225 aa16.25■□□□□ 0.19
COL15A1-204ENST00000496686 PIN4Q9Y237 131 aaKnown RBP16.25■□□□□ 0.19
COL15A1-204ENST00000496686 MED7O43513 233 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 PRMT2P55345 433 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 RBM10P98175 930 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 TRIM32Q13049 653 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ARHGEF6Q15052 776 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ZBTB6Q15916 424 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 XKR4Q5GH76 650 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 UBXN11Q5T124 520 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 NAA35Q5VZE5 725 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 SCARA3Q6AZY7 606 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ALKAL1Q6UXT8 129 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 RASGEF1CQ8N431 466 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 NOA1Q8NC60 698 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 SPATA4Q8NEY3 305 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 BEST2Q8NFU1 509 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ACTRT1Q8TDG2 376 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 TMEM40Q8WWA1 233 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 HPDLQ96IR7 371 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 NUP85Q9BW27 656 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 EIF2AQ9BY44 585 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 ANKZF1Q9H8Y5 726 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 CNOT8Q9UFF9 292 aaKnown RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 LCMT1Q9UIC8 334 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 AGAP1Q9UPQ3 857 aa16.24■□□□□ 0.19
COL15A1-204ENST00000496686 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.24■□□□□ 0.19
COL15A1-204ENST00000496686 KCNK3O14649 394 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 KCNE1P15382 129 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CD58P19256 250 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CCND3P30281 292 aaPredicted RBP16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CXCR5P32302 372 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CAP1Q01518 475 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 MYO1EQ12965 1108 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 WDR72Q3MJ13 1102 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 GDF6Q6KF10 455 aaPredicted RBP16.23■□□□□ 0.19
COL15A1-204ENST00000496686 TMEM35BQ8NCS4 154 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CYFIP2Q96F07 1278 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 PARD6BQ9BYG5 372 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 WNT8AQ9H1J5 351 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CARD9Q9H257 536 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CHST12Q9NRB3 414 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
COL15A1-204ENST00000496686 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
COL15A1-204ENST00000496686 UBQLN1Q9UMX0 589 aaKnown RBP16.23■□□□□ 0.19
COL15A1-204ENST00000496686 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 SCINQ9Y6U3 715 aa16.23■□□□□ 0.19
COL15A1-204ENST00000496686 CCDC151A5D8V7 595 aa16.22■□□□□ 0.19
COL15A1-204ENST00000496686 DDX3YO15523 660 aaKnown RBP16.22■□□□□ 0.19
COL15A1-204ENST00000496686 CILPO75339 1184 aa16.22■□□□□ 0.19
COL15A1-204ENST00000496686 RECQL4O94761 1208 aa16.22■□□□□ 0.19
COL15A1-204ENST00000496686 CD4P01730 458 aa16.22■□□□□ 0.19
COL15A1-204ENST00000496686 CALB1P05937 261 aa16.22■□□□□ 0.19
COL15A1-204ENST00000496686 ASGR1P07306 291 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms