RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TOPORSQ9NS56 1045 aaPredicted RBP16.27■□□□□ 0.2
SDF4-207ENST00000494748 SMAPO00193 183 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 SLC1A1P43005 524 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 MXRA7P84157 204 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 GTF2BQ00403 316 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 ACSBG2Q5FVE4 666 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 IRGCQ6NXR0 463 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.19
SDF4-207ENST00000494748 CFAP57Q96MR6 1250 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 ACCSQ96QU6 501 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 ZFP69BQ9UJL9 534 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 C2CD2Q9Y426 696 aa16.27■□□□□ 0.19
SDF4-207ENST00000494748 ARHGEF35A5YM69 484 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 NVLO15381 856 aaKnown RBP16.26■□□□□ 0.19
SDF4-207ENST00000494748 CACNB3P54284 484 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 ROR2Q01974 943 aaKnown RBP16.26■□□□□ 0.19
SDF4-207ENST00000494748 RASA2Q15283 850 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 LRRC8CQ8TDW0 803 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 TAS1R2Q8TE23 839 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 MZB1Q8WU39 189 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 ZFAND2BQ8WV99 257 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 FOXP3Q9BZS1 431 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 ARL8BQ9NVJ2 186 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 DNALI1O14645 258 aaPredicted RBP16.26■□□□□ 0.19
SDF4-207ENST00000494748 ZSCAN5DPP0CG00 497 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 CNGA1P29973 690 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 PPP1R15BQ5SWA1 713 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 APBB1IPQ7Z5R6 666 aaPredicted RBP16.26■□□□□ 0.19
SDF4-207ENST00000494748 NPHS2Q9NP85 383 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 KCNQ5Q9NR82 932 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 NFASCO94856 1347 aa16.26■□□□□ 0.19
SDF4-207ENST00000494748 POC1B-GALNT4F8VUJ3 575 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 PROSCO94903 275 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 RASSF2P50749 326 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 OCRLQ01968 901 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 HP1BP3Q5SSJ5 553 aaPredicted RBP16.25■□□□□ 0.19
SDF4-207ENST00000494748 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ZNF398Q8TD17 642 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 OSBPL8Q9BZF1 889 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 RIMBP2O15034 1052 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 SMIM24O75264 130 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ETS1P14921 441 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 VHLP40337 213 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 CEP55Q53EZ4 464 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 LVRNQ6Q4G3 990 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ZNF365Q70YC5 407 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 MON1BQ7L1V2 547 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ST6GALNAC4Q9H4F1 302 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 DLGAP2Q9P1A6 1054 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 KRT36O76013 467 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 LMNAP02545 664 aaKnown RBP16.25■□□□□ 0.19
SDF4-207ENST00000494748 VIL1P09327 827 aaKnown RBP16.25■□□□□ 0.19
SDF4-207ENST00000494748 PLS3P13797 630 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 GCLCP48506 637 aaPredicted RBP16.25■□□□□ 0.19
SDF4-207ENST00000494748 GPX6P59796 221 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ALCAMQ13740 583 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 TSNAXIP1Q2TAA8 658 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 CPA5Q8WXQ8 436 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 SMC6Q96SB8 1091 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 ADAM33Q9BZ11 813 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
SDF4-207ENST00000494748 PSTPIP1O43586 416 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 LIASO43766 372 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 GDF11O95390 407 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 CA4P22748 312 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 KBTBD2Q8IY47 623 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 SSU72Q9NP77 194 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.24■□□□□ 0.19
SDF4-207ENST00000494748 SENP1Q9P0U3 644 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 LRCH1Q9Y2L9 728 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 GSC2O15499 205 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 RCN1Q15293 331 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 KRT39Q6A163 491 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 WDR60Q8WVS4 1066 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 PTPRN2Q92932 1015 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 WDR11Q9BZH6 1224 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 DNPEPQ9ULA0 475 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 TBX10O75333 385 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 BBOX1O75936 387 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 CFHP08603 1231 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 ADRA1DP25100 572 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 TCP10Q12799 353 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms