RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ZNF568Q3ZCX4 644 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CCDC14Q49A88 953 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC9C1Q4G0N8 1177 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD20A4Q4UJ75 823 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZCWPW2Q504Y3 356 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 EAPPQ56P03 285 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 TDRD12Q587J7 1177 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC45A4Q5BKX6 768 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ACSBG2Q5FVE4 666 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DEPDC1Q5TB30 811 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MAP3K21Q5TCX8 1036 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 C6orf163Q5TEZ5 329 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SOGA3Q5TF21 947 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TCERG1LQ5VWI1 586 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 HGSNATQ68CP4 663 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DUPD1Q68J44 220 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 FAAH2Q6GMR7 532 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RWDD4Q6NW29 188 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 LRRC8BQ6P9F7 803 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RFWD3Q6PCD5 774 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 C16orf87Q6PH81 154 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 C1orf228Q6PIY5 440 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZDHHC24Q6UX98 284 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TREML4Q6UXN2 200 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KSR2Q6VAB6 950 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PACS1Q6VY07 963 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRMT10CQ7L0Y3 403 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 CYFIP1Q7L576 1253 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 OTUD6AQ7L8S5 288 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CHST3Q7LGC8 479 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NET1Q7Z628 596 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 ARPINQ7Z6K5 226 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MICU3Q86XE3 530 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SFR1Q86XK3 245 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DZIP1Q86YF9 867 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 PDSS2Q86YH6 399 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 C2CD5Q86YS7 1000 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TREML1Q86YW5 311 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC9A9Q8IVB4 645 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RHOT2Q8IXI1 618 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRIM22Q8IYM9 498 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SYCE1Q8N0S2 351 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 VWA5B2Q8N398 1253 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TTC39CQ8N584 583 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SRBD1Q8N5C6 995 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 LZTR1Q8N653 840 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PI4KAP1Q8N8J0 262 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 LRRC57Q8N9N7 239 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GIMAP8Q8ND71 665 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC17A8Q8NDX2 589 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CXorf38Q8TB03 319 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GDAP1Q8TB36 358 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 EPS8L3Q8TE67 593 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 USP33Q8TEY7 942 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SCFD1Q8WVM8 642 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 STARD8Q92502 1023 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 APPBP2Q92624 585 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ATP6V0A1Q93050 837 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 P2RX5Q93086 422 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 EME1Q96AY2 570 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SKA1Q96BD8 255 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRIM11Q96F44 468 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 BTBD9Q96Q07 612 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRPM7Q96QT4 1865 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CAMKK2Q96RR4 588 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MIPEPQ99797 713 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CCT7Q99832 543 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DUSP9Q99956 384 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 HINFPQ9BQA5 517 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRIM51Q9BSJ1 452 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TUBB6Q9BUF5 446 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NOC4LQ9BVI4 516 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 SPZ1Q9BXG8 430 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RNF26Q9BY78 433 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 NACAP1Q9BZK3 213 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DRC3Q9H069 523 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KIAA1683Q9H0B3 1180 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NT5C3AQ9H0P0 336 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TMEM60Q9H2L4 133 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RUBCNLQ9H714 662 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CLK4Q9HAZ1 481 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 LY9Q9HBG7 655 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PLGRKTQ9HBL7 147 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 LRRC4CQ9HCJ2 640 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PALMDQ9NP74 551 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DISC1Q9NRI5 854 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 METTL5Q9NRN9 209 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 BTG4Q9NY30 223 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZFP69BQ9UJL9 534 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 HAO1Q9UJM8 370 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PPP1R9AQ9ULJ8 1098 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NENFQ9UMX5 172 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 STX8Q9UNK0 236 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CARD8Q9Y2G2 431 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 FRMD4BQ9Y2L6 1034 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GDAQ9Y2T3 454 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MAP3K2Q9Y2U5 619 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GIT1Q9Y2X7 761 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ATP6V0A2Q9Y487 856 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms