RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ASB16Q96NS5 453 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 C17orf75Q9HAS0 396 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
SKA1-205ENST00000494518 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 YIPF1Q9Y548 306 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 NCANO14594 1321 aa13.78□□□□□ -0.2
SKA1-205ENST00000494518 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
SKA1-205ENST00000494518 MED19A0JLT2 244 aaPredicted RBP13.77□□□□□ -0.21
SKA1-205ENST00000494518 ZNF197O14709 1029 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 PPEF2O14830 753 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 CLDN3O15551 220 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 VNN2O95498 520 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
SKA1-205ENST00000494518 MCL1Q07820 350 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 MTAPQ13126 283 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 VITQ6UXI7 678 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 TRMT61BQ9BVS5 477 aaKnown RBP13.77□□□□□ -0.21
SKA1-205ENST00000494518 TIPINQ9BVW5 301 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 SLITRK6Q9H5Y7 841 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 ASAH2Q9NR71 780 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 NCDNQ9UBB6 729 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 FBXO4Q9UKT5 387 aa13.77□□□□□ -0.21
SKA1-205ENST00000494518 LACTBL1A8MY62 500 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
SKA1-205ENST00000494518 PPP2R3AQ06190 1150 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 FZD5Q13467 585 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 TMEM119Q4V9L6 283 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 RILPL1Q5EBL4 403 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 HYIQ5T013 277 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 DSTYKQ6XUX3 929 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 DGLUCYQ7Z3D6 616 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 SHKBP1Q8TBC3 707 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 ZSCAN18Q8TBC5 510 aaPredicted RBP13.76□□□□□ -0.21
SKA1-205ENST00000494518 LRRC15Q8TF66 581 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 DNASE1L2Q92874 299 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 SMARCD2Q92925 531 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 CLDN23Q96B33 292 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 RSPRY1Q96DX4 576 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 NTPCRQ9BSD7 190 aaKnown RBP13.76□□□□□ -0.21
SKA1-205ENST00000494518 PIAS3Q9Y6X2 628 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 DENND4CQ5VZ89 1909 aa13.76□□□□□ -0.21
SKA1-205ENST00000494518 A0A1W2PRU2 124 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 TTC26A0AVF1 554 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 H3BQV1 296 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 K7ENM7 598 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 SPTLC1O15269 473 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 NCAM2O15394 837 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 SOAT2O75908 522 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 CLTAP09496 248 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 PSMC3P17980 439 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 GJB2P29033 226 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 MAGEA9P43362 315 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 LIG4P49917 911 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 DUSP4Q13115 394 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 ENOX2Q16206 610 aaKnown RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 LPAL2Q16609 132 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 STXBP5Q5T5C0 1151 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 USP37Q86T82 979 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 TTC9BQ8N6N2 239 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 TMEM209Q96SK2 561 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 NELL2Q99435 816 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 DNAJC25Q9H1X3 360 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 ZHX3Q9H4I2 956 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 ZNF334Q9HCZ1 680 aaPredicted RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 ZSCAN32Q9NX65 697 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 DAXXQ9UER7 740 aaPredicted RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 UBQLN1Q9UMX0 589 aaKnown RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 SMG5Q9UPR3 1016 aaKnown RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 SLC27A5Q9Y2P5 690 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 MRPS17Q9Y2R5 130 aaKnown RBP13.75□□□□□ -0.21
SKA1-205ENST00000494518 PCDHGA2Q9Y5H1 932 aa13.75□□□□□ -0.21
SKA1-205ENST00000494518 HEPACAM2A8MVW5 462 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 M0QZQ0 153 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 FAM13AO94988 1023 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
SKA1-205ENST00000494518 LRPAP1P30533 357 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
SKA1-205ENST00000494518 SOX9P48436 509 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 RSPO4Q2I0M5 234 aaPredicted RBP13.74□□□□□ -0.21
SKA1-205ENST00000494518 ERICH6BQ5W0A0 696 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 MAP4K3Q8IVH8 894 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 TTC8Q8TAM2 541 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 FAM3CQ92520 227 aa13.74□□□□□ -0.21
SKA1-205ENST00000494518 IRF7Q92985 503 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms