RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 RUFY4Q6ZNE9 571 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-208ENST00000494028 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 CYFIP2Q96F07 1278 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SLITRK6Q9H5Y7 841 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ERVK-5Q9HDB9 667 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 HPCAL4Q9UM19 191 aa11.37□□□□□ -0.59
CLCN6-208ENST00000494028 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 KRIT1O00522 736 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 SPOPO43791 374 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 FGGP02679 453 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 GLI1P08151 1106 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 FGFR4P22455 802 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 CTGFP29279 349 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 PEX5P50542 639 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 EPHB4P54760 987 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 ADAM17P78536 824 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 PAK2Q13177 524 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 KIZQ2M2Z5 673 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 SGSM1Q2NKQ1 1148 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 SLC10A6Q3KNW5 377 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 PPP1R2P3Q6NXS1 205 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 AADACL2Q6P093 401 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 UBL4BQ8N7F7 174 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 CAVIN3Q969G5 261 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 SNX27Q96L92 541 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 TRIM7Q9C029 511 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 FAM49AQ9H0Q0 323 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
CLCN6-208ENST00000494028 ASB7Q9H672 318 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 SMYD3Q9H7B4 428 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 VIPAS39Q9H9C1 493 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
CLCN6-208ENST00000494028 NRCAMQ92823 1304 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 ESYT3A0FGR9 886 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 CCDC66A2RUB6 948 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 GPR32O75388 356 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 NPTXRO95502 500 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 ITGB3P05106 788 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 CYP2C9P11712 490 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 CYP2B6P20813 491 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 POLR2BP30876 1174 aaKnown RBP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 HOXC8P31273 242 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 CDH5P33151 784 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 GUCY2FP51841 1108 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 GUCY2DQ02846 1103 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 GABPB1Q06547 395 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 CRHR2Q13324 411 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 NNTQ13423 1086 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 SMC1AQ14683 1233 aaKnown RBP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 ZNF667Q5HYK9 610 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 SEL1L2Q5TEA6 688 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 LIN9Q5TKA1 542 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 PLEKHA7Q6IQ23 1121 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 EMBQ6PCB8 327 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 SND1Q7KZF4 910 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLCN6-208ENST00000494028 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 TFAP2BQ92481 460 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 OSMRQ99650 979 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 PLEKHA4Q9H4M7 779 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 HMGXB4Q9UGU5 601 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 NR2E1Q9Y466 385 aa11.35□□□□□ -0.59
CLCN6-208ENST00000494028 A0A1B0GUA9 196 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 TCRBV5S1A1TA0A578 114 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 PHF2O75151 1096 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 PROSCO94903 275 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 STAU1O95793 577 aaKnown RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 MYL3P08590 195 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 KRT19P08727 400 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 DARSP14868 501 aaKnown RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 HSPA6P17066 643 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 MMP8P22894 467 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ECHS1P30084 290 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms