RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TRAF3IP3Q9Y228 551 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 CDY1Q9Y6F8 540 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 CITO14578 2027 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 REV3LO60673 3130 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 ADAM12O43184 909 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 TBC1D4O60343 1298 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 OAZ2O95190 189 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 TNNC2P02585 160 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 SPATA31D3P0C874 917 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 TYMPP19971 482 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 YWHAHQ04917 246 aaPredicted RBP18.74■□□□□ 0.59
MDC1-206ENST00000489540 PSMD6Q15008 389 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 CTXN3Q4LDR2 81 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 C15orf39Q6ZRI6 1047 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 SPATA31D4Q6ZUB0 917 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 USP37Q86T82 979 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 CSGALNACT2Q8N6G5 542 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 C1orf127Q8N9H9 656 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 SENP8Q96LD8 212 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 MFSD14AQ96MC6 490 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 ZNF560Q96MR9 790 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
MDC1-206ENST00000489540 FNBP1Q96RU3 617 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 RHOBTB2Q9BYZ6 727 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 ZDHHC7Q9NXF8 308 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 DSEQ9UL01 958 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 R3HCC1Q9Y3T6 440 aaKnown RBP18.74■□□□□ 0.59
MDC1-206ENST00000489540 PCDHA5Q9Y5H7 936 aa18.74■□□□□ 0.59
MDC1-206ENST00000489540 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 SPTLC1O15269 473 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 ODC1P11926 461 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 RBP5P82980 135 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 ZP2Q05996 745 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 CYP24A1Q07973 514 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 SV2CQ496J9 727 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 ZNF280DQ6N043 979 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 RSPO2Q6UXX9 243 aaPredicted RBP18.73■□□□□ 0.59
MDC1-206ENST00000489540 TMC5Q6UXY8 1006 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 RTL10Q7L3V2 364 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 GPR149Q86SP6 731 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 GJD3Q8N144 294 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 LRRC52Q8N7C0 313 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 FBXW11Q9UKB1 542 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 AGAP1Q9UPQ3 857 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
MDC1-206ENST00000489540 TRIP11Q15643 1979 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 A0A0C4DFX4 3053 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 CCDC195A0A1B0GUA6 201 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 KPNA7A9QM74 516 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 PAPLNO95428 1278 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 NR3C1P04150 777 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 ITGB3P05106 788 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 POLR2BP30876 1174 aaKnown RBP18.72■□□□□ 0.59
MDC1-206ENST00000489540 NFIL3Q16649 462 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 LIN9Q5TKA1 542 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
MDC1-206ENST00000489540 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 ZNF461Q8TAF7 563 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 CCDC127Q96BQ5 260 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 MTMR12Q9C0I1 747 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 MAFFQ9ULX9 164 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 FRMD4BQ9Y2L6 1034 aa18.72■□□□□ 0.59
MDC1-206ENST00000489540 TIMM13Q9Y5L4 95 aaPredicted RBP18.72■□□□□ 0.59
MDC1-206ENST00000489540 C19orf67A6NJJ6 358 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 OR6C75A6NL08 312 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 CYB561D2O14569 222 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 ZMYND10O75800 440 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 ABLIM3O94929 683 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 CYP11A1P05108 521 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 DLATP10515 647 aaKnown RBP18.71■□□□□ 0.59
MDC1-206ENST00000489540 TNNI1P19237 187 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 RPL13P26373 211 aaKnown RBP18.71■□□□□ 0.59
MDC1-206ENST00000489540 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
MDC1-206ENST00000489540 COBLL1Q53SF7 1204 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 CCDC149Q6ZUS6 474 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 METTL23Q86XA0 190 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 OR5B17Q8NGF7 314 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 CXorf38Q8TB03 319 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 BORCS6Q96GS4 357 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 CGRRF1Q99675 332 aa18.71■□□□□ 0.59
MDC1-206ENST00000489540 KRT19P08727 400 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 HNRNPA1P09651 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
MDC1-206ENST00000489540 ELF1P32519 619 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 ARPP19P56211 112 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 ROR1Q01973 937 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 TPGS2Q68CL5 300 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 LMBRD2Q68DH5 695 aaPredicted RBP18.7■□□□□ 0.58
MDC1-206ENST00000489540 OVOS1Q6IE37 1185 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 PRKD2Q9BZL6 878 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 TTC28Q96AY4 2481 aa18.7■□□□□ 0.58
MDC1-206ENST00000489540 RFPL2O75678 378 aa18.69■□□□□ 0.58
MDC1-206ENST00000489540 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
MDC1-206ENST00000489540 HOXA9P31269 272 aa18.69■□□□□ 0.58
MDC1-206ENST00000489540 AP3M2P53677 418 aa18.69■□□□□ 0.58
MDC1-206ENST00000489540 MYO1EQ12965 1108 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms