RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TMX3Q96JJ7 454 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ASB16Q96NS5 453 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 FIZ1Q96SL8 496 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 LRRC3Q9BY71 257 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 DNAJC25Q9H1X3 360 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 CYP4F11Q9HBI6 524 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 CDV3Q9UKY7 258 aaKnown RBP12.83□□□□□ -0.36
ACTN4-206ENST00000489451 FAM170BA6NMN3 283 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 M0QZQ0 153 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 PRRG1O14668 218 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 GJB2P29033 226 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 LRPAP1P30533 357 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 MCM4P33991 863 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 EPHA5P54756 1037 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 TWF1Q12792 350 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 TPGS2Q68CL5 300 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 VITQ6UXI7 678 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 NELL1Q92832 810 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 RSPRY1Q96DX4 576 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 BLOC1S4Q9NUP1 217 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 AFF4Q9UHB7 1163 aaKnown RBP12.82□□□□□ -0.36
ACTN4-206ENST00000489451 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
ACTN4-206ENST00000489451 SCN1AP35498 2009 aa12.82□□□□□ -0.36
ACTN4-206ENST00000489451 H7C4K7 107 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ARNTLO00327 626 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 MICAL2O94851 1124 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 PIGRP01833 764 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ADRB2P07550 413 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ELF1P32519 619 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ZNF131P52739 623 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 PFKPQ01813 784 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 STRN3Q13033 797 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ENOX2Q16206 610 aaKnown RBP12.81□□□□□ -0.36
ACTN4-206ENST00000489451 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
ACTN4-206ENST00000489451 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 F5P12259 2224 aa12.81□□□□□ -0.36
ACTN4-206ENST00000489451 LACTBL1A8MY62 500 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 TISP43B9A030 160 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 SPTLC1O15269 473 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 CLDN3O15551 220 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 OAZ2O95190 189 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 CLTAP09496 248 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 TDGF1P13385 188 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 VIPR2P41587 438 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 TEAD2Q15562 447 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 ZNF528Q3MIS6 628 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 PDZD4Q76G19 769 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 SHKBP1Q8TBC3 707 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 BCO2Q9BYV7 579 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 IKZF4Q9H2S9 585 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 PLEKHA5Q9HAU0 1116 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 KCND2Q9NZV8 630 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 FBXO4Q9UKT5 387 aa12.8□□□□□ -0.36
ACTN4-206ENST00000489451 ANKRD11Q6UB99 2663 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 KIF26AQ9ULI4 1882 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-206ENST00000489451 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 LILRB5O75023 590 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 CYP3A5P20815 502 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 SMTNP53814 917 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-206ENST00000489451 STXBP5Q5T5C0 1151 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 GPBP1Q86WP2 473 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 ZBTB44Q8NCP5 570 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 APPL2Q8NEU8 664 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 LRRC3BQ96PB8 259 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-206ENST00000489451 NCDNQ9UBB6 729 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 CPSF3Q9UKF6 684 aaKnown RBP12.79□□□□□ -0.36
ACTN4-206ENST00000489451 ODF2LQ9ULJ1 636 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 TBX20Q9UMR3 447 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 UBQLN1Q9UMX0 589 aaKnown RBP12.79□□□□□ -0.36
ACTN4-206ENST00000489451 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
ACTN4-206ENST00000489451 FASNP49327 2511 aaKnown RBP12.78□□□□□ -0.36
ACTN4-206ENST00000489451 A0A0B4J269 797 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms