RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZFYVE19Q96K21 471 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 LRRC3Q9BY71 257 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 TUFT1Q9NNX1 390 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 SLC38A7Q9NVC3 462 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 MAFFQ9ULX9 164 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 CEP295Q9C0D2 2601 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 ATG2BQ96BY7 2078 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 C1QTNF9BB2RNN3 333 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 NEMFO60524 1076 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 RPP40O75818 363 aaKnown RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 C1QTNF9P0C862 333 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 GRM5P41594 1212 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 EFNA5P52803 228 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 CCINQ13939 588 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 PPP2R5AQ15172 486 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 STXBP5Q5T5C0 1151 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 SUSD3Q96L08 255 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 CCDC94Q9BW85 323 aaPredicted RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 ZMIZ1Q9ULJ6 1067 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 TNFSF13BQ9Y275 285 aa17.73■□□□□ 0.43
USP48-210ENST00000489108 KIF26AQ9ULI4 1882 aaPredicted RBP17.73■□□□□ 0.43
USP48-210ENST00000489108 ARHGEF35A5YM69 484 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 K7ERI5 159 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 CPB1P15086 417 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 RPL9P32969 192 aaKnown RBP17.72■□□□□ 0.43
USP48-210ENST00000489108 PLA2G2CQ5R387 149 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 ZNF280DQ6N043 979 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 PSAPL1Q6NUJ1 521 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 PKN3Q6P5Z2 889 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 TMC8Q8IU68 726 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 SYNPOQ8N3V7 929 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 DDX12PQ92771 950 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 CDT1Q9H211 546 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 ORC3Q9UBD5 711 aaPredicted RBP17.72■□□□□ 0.43
USP48-210ENST00000489108 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
USP48-210ENST00000489108 YIPF1Q9Y548 306 aa17.72■□□□□ 0.43
USP48-210ENST00000489108 CTDNEP1O95476 244 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 VNN2O95498 520 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 CCDC192P0DO97 292 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 KCNE1P15382 129 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 MCM4P33991 863 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 UNQ6494/PRO21346Q6UXR6 183 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 APPL2Q8NEU8 664 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 ACO2Q99798 780 aaKnown RBP17.71■□□□□ 0.43
USP48-210ENST00000489108 POLR3CQ9BUI4 534 aaPredicted RBP17.71■□□□□ 0.43
USP48-210ENST00000489108 DNAJC25Q9H1X3 360 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 PDRG1Q9NUG6 133 aa17.71■□□□□ 0.43
USP48-210ENST00000489108 LAMA1P25391 3075 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 EML5Q05BV3 1969 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 BTBD18B2RXH4 712 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 DPYSL4O14531 572 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 REC8O95072 547 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 OR4Q2P0C623 313 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 MARCKSP29966 332 aaPredicted RBP17.7■□□□□ 0.42
USP48-210ENST00000489108 TNK2Q07912 1038 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 RNF43Q68DV7 783 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 BEST2Q8NFU1 509 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 ACAP3Q96P50 834 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 PGLYRP2Q96PD5 576 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 MKNK1Q9BUB5 465 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 CITO14578 2027 aa17.7■□□□□ 0.42
USP48-210ENST00000489108 ZZEF1O43149 2961 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 CCDC163A0A0D9SF12 145 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 GIPC1O14908 333 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 MEFVO15553 781 aaPredicted RBP17.69■□□□□ 0.42
USP48-210ENST00000489108 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
USP48-210ENST00000489108 MPLP40238 635 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 EPHB3P54753 998 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 DUSP4Q13115 394 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 ZNF568Q3ZCX4 644 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 TCEAL6Q6IPX3 200 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 HAUS6Q7Z4H7 955 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 TMEM130Q8N3G9 435 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 TCEAL3Q969E4 200 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 VPS45Q9NRW7 570 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 CNTN3Q9P232 1028 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 PCDHB8Q9UN66 801 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 PCDHGA5Q9Y5G8 931 aa17.69■□□□□ 0.42
USP48-210ENST00000489108 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
USP48-210ENST00000489108 ASPMQ8IZT6 3477 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 PFKFB2O60825 505 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 RPA1P27694 616 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
USP48-210ENST00000489108 GPR158Q5T848 1215 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 GAREM2Q75VX8 874 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 KDF1Q8NAX2 398 aaPredicted RBP17.68■□□□□ 0.42
USP48-210ENST00000489108 WASF1Q92558 559 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 KIFAP3Q92845 792 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms