RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 TMEM270Q6UE05 265 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ANKRD33Q7Z3H0 272 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PDCL2Q8N4E4 241 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 UBR7Q8N806 425 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 BEST2Q8NFU1 509 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 SLC30A5Q8TAD4 765 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 NENFQ9UMX5 172 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 WEE2P0C1S8 567 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 COL6A1P12109 1028 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 CYP11B1P15538 503 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 CD58P19256 250 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ATICP31939 592 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 MAGEA1P43355 309 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 RAB27AP51159 221 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PDE6CP51160 858 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 SOX4Q06945 474 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 AGMOQ6ZNB7 445 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PALB2Q86YC2 1186 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 HACE1Q8IYU2 909 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 GAD1Q99259 594 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 GOLGA2P5Q9HBQ8 144 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 CNTN6Q9UQ52 1028 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 MYH10P35580 1976 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 NBNO60934 754 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF623O75123 536 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 CHRNB2P17787 502 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 RAP1GAPP47736 663 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 GPNMBQ14956 572 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 CCDC122Q5T0U0 273 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 C9orf57Q5W0N0 161 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 RPUSD2Q8IZ73 545 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 RBBP8NLQ8NC74 664 aaPredicted RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 RNF169Q8NCN4 708 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 LINC01599Q8WXQ3 324 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 PACSIN1Q9BY11 444 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 CISHQ9NSE2 258 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 SEPT11Q9NVA2 429 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 OGFRQ9NZT2 677 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 GUCA1BQ9UMX6 200 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 DUSP10Q9Y6W6 482 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 FAM170AA1A519 330 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 STAU1O95793 577 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 MMEP08473 750 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 TLE2Q04725 743 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 FAAP100Q0VG06 881 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 NAB2Q15742 525 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF662Q6ZS27 426 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 RTN4RL1Q86UN2 441 aaPredicted RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
COL21A1-211ENST00000488912 TSPAN18Q96SJ8 248 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 SDCBP2Q9H190 292 aa11.69□□□□□ -0.54
COL21A1-211ENST00000488912 ANO9A1A5B4 782 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 FANCGO15287 622 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 XPOTO43592 962 aaKnown RBP11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF132P52740 706 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 CDH8P55286 799 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
COL21A1-211ENST00000488912 FMO1Q01740 532 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 CDR2Q01850 454 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 KIF5AQ12840 1032 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 MYO1EQ12965 1108 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 RPS6KC1Q96S38 1066 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 HIPK3Q9H422 1215 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 TAS2R14Q9NYV8 317 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 GIT1Q9Y2X7 761 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 TMCO5BA8MYB1 307 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 DCDC2CA8MYV0 355 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
COL21A1-211ENST00000488912 KRT86O43790 486 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 CYP3A5P20815 502 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 SCNN1GP51170 649 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 GNG11P61952 73 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 TNNC1P63316 161 aa11.68□□□□□ -0.54
COL21A1-211ENST00000488912 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms